Seriola lalandi dorsalis (Yellowtail amberjack): 111672326
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Entry
111672326 CDS
T06058
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111672326
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slal03021
]
111672326
03036 Chromosome and associated proteins [BR:
slal03036
]
111672326
Transcription machinery [BR:
slal03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
111672326
Coactivators
SAGA/TFTC/STAGA complex
111672326
Chromosome and associated proteins [BR:
slal03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
111672326
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
TAF
Motif
Other DBs
NCBI-GeneID:
111672326
NCBI-ProteinID:
XP_023285501
Ensembl:
ENSSLDG00000016833
LinkDB
All DBs
Position
Unknown
AA seq
1078 aa
AA seq
DB search
MAGASDPLEDMLFSEVDEKAVSDLVGSLESQLAGQSNPAGKTDENGGAGSVAPANHHLGK
TLPAPVGTTTLEQQQQGRRNKPEMRQEINSKDVSPDKAVTSPSLGCTPSFGEPSTTSAAC
VNATSSGSQSHGASITTLTASGVSTLASPPVSISTTSSRGSKVSPGTGETSTEANPARKR
ISQPRRTASARIKSLNGAAVTTRRNSNTAVVENASSVDPSETTPNSTRPVTSSINTSTFT
LSNASLPVGQSAIALDRGTPTIALHRLPSHIVASIAQNGNGTSVSALVQQGARIGPITSS
ASQDNHSKTVTDTGASKTDDCQSKIVMSSQSGSVNSVINTVSSASSVVTTTTTTTAAATT
TTTITQPLSSASTAACVTGVATSSVCGIGQTTSVTTTISMVRPTAPSPTPAVATSAQSQP
RPGLTAPQRIVAPQLIVRPPQQQTTIQLPPGFTIPPGMVLVRTELGQLVMVPQQALAQAQ
AQAQAQAQNNISPRPATPTTGTSFRVTTPQSPVTSQTTRQCPLTPAKMVPSPSPTPSSSA
LQTSSSSSSSSSSCCPALRPKGPVAPAVAVTAPQQTPVVMAPQAPVQAASQPVQPPQPPQ
TGIAAAPGASVVSQEMQENVKKCKNFLATLIKLASHNSPSPETSKNVKALVQDLLDAKIE
PEEFTSRLQTELKSSPQPYLVPFLKKSLPALRLSLLNSQQSLTQPPQQGVKPAPGGVPPA
IVAGPAVRIRHPNSVSTTTGASALPAGTLGHAAAMGIKTAGAVGGQVRMPVVITQSVRAQ
GTMGKGAVIQAGKCPVGLAVQVSGNQKNKLNDPGGGSFRDDDDINDVASMAGVNLNEESA
RILATNSELVGTQIRSCKDEAFLHPGLLHRRILETAKKFGVTEVPMEAVTFISHATQSRL
RTVVEKVSTIAQHRLDSCKDDECYEQSADVRSQLRFFEQLERIEKQRKDEQEREILLKAA
KSRSRQEDPEQARLKQKAKEMQQQELAQMRQRDANLTALAAIGPRKKRKVDSPGATPSGT
EVSGSTAGSPASSSVPSTSSRQYTRQRITRVNLRDLIFYMEQERETAHSLLLYRALLK
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgcctccgaccccctggaagatatgctcttttcagaggtggatgaaaaggct
gtgagcgacctagtgggctcattggagtcacagcttgctggccaaagcaacccagcaggt
aaaacagacgaaaacggaggcgctggctcagtggcccccgctaaccatcacttaggaaaa
acgctaccagctccagtgggcaccacaacactagaacaacaacaacaaggacggcgtaat
aaacccgagatgcgccaggagatcaactctaaagacgttagtccggataaagctgtcaca
tctccttctctgggttgtaccccgtcttttggcgagccgtccaccacttcggctgcttgt
gtgaacgccactagcagcggttcgcaatcacatggagcatccatcacaacactgactgca
tctggtgtgtcaactttggcatctcctccagtcagcatcagcaccacatccagccgcggc
tctaaggtttctccgggcacaggtgagacgtcgacagaagctaacccggcgagaaaacgc
ataagccagccacggaggaccgcttcggctcggataaagagtttaaacggcgcagctgta
acgacgaggaggaacagcaacacagcggtggtcgaaaacgctagctctgtggatcctagt
gaaactacaccaaactctactcggccggtgacatcctctattaacacttcgactttcacc
ttatctaacgccagcttgcctgtaggtcagtcggctattgctctcgaccgggggactccc
accattgctttgcatagactcccgagtcacattgtagccagtatagcccagaacggcaac
gggaccagtgtttcggccttggtccagcagggcgctcgcataggacccatcacctcttca
gcctcacaggataaccacagcaaaacggtcacagacactggggcttccaaaacagacgat
tgtcagtccaaaattgtaatgtcaagccagtctggtagtgtcaactctgtaataaacact
gtttcttctgcatcttctgttgtcacaacaacaacaacaactacagcagcagctacaaca
actactacaataacccagcctctgagctctgcctcaaccgctgcctgtgtcacaggggtg
gcaactagttctgtatgtggtattggtcagactacatcagtgactaccactattagcatg
gtcagacccacagctccctctcccacacctgctgtggccacctccgcacagtctcaaccc
cgtcctggacttacagcacctcaaaggatcgtagcccctcagctgattgtcagaccacct
cagcagcagacgaccattcagcttccccctgggtttaccatcccaccgggaatggtgttg
gtgcgtacagagttgggccagctggtgatggttcctcagcaggctttggctcaagctcag
gctcaagctcaggcccaggcccagaacaacatctctccacgacctgctacccccaccaca
ggaacatccttcagagtaacaactccacagtctcctgtgacctctcagaccaccaggcag
tgtcctttgaccccggccaagatggtaccatctccctctcccactccttccagctctgcc
ctccagacctcctcctcttcttcttcttcctcctcctcctgctgtcctgcactccgccca
aagggccccgtggcgccggcagtggctgtgacggctccgcagcagacccccgtggttatg
gcccctcaggccccagtccaggctgcctcgcagccagtgcagcctccgcagcctccgcag
actggcatcgcagcggcccctggagcctctgtcgtgtcccaggaaatgcaagagaacgtc
aagaagtgtaagaatttcctggccacactcatcaagctggcgtctcacaattctccatcc
cctgagacttccaagaacgtcaaggctctggttcaggaccttctggatgccaagattgaa
ccggaggagttcaccagccggctgcagactgagctcaagtcgtctccgcagccttacctg
gtgccctttctcaagaagagcctcccggccctaaggctgtctttgctgaatagtcagcag
tccctgacccagcccccgcagcagggagtcaaaccagcacccggcggcgtccctcccgcc
attgtggccggtccagctgtccgcatacgccaccctaacagcgtcagcaccaccacgggt
gccagtgcgctgcccgccgggacgctcggacatgcagctgccatgggtatcaagacagcg
ggcgctgtcggcggccaggtgcggatgcctgtggtgatcacacagtctgtcagagcacaa
ggcacaatggggaagggagccgtgatccaagcggggaaatgtcccgtgggcctggctgtg
caggtctcggggaatcagaaaaacaagctcaacgaccccggaggaggctctttcagggat
gatgatgacatcaatgacgtggcctccatggctggcgtgaacctgaacgaggagagcgct
agaatactcgccaccaactcggagctagtgggaacgcaaatccgctcatgcaaagacgag
gcctttctccacccagggctgctacaccgacgaattctggaaaccgctaagaagtttgga
gtcacagaggtccccatggaggctgtaacattcatctcacacgccacacagtcacgactt
cgcactgtggtagaaaaggtttcgactatcgcacagcaccgactggactcctgtaaggac
gatgagtgctacgagcagtctgcagacgttcgctctcagctccgcttcttcgagcagctg
gagagaatcgagaagcagaggaaggacgagcaggagagagagatcctgttgaaagccgct
aaaagtcgctccaggcaagaggacccagagcaagctcgactgaaacagaaagctaaggag
atgcaacaacaggaactggcgcagatgcggcagcgagatgccaaccttacagcactagct
gccattggaccccgcaaaaaacgcaaggtggattcaccaggggccaccccatcagggacc
gaggtttcaggcagcacggcgggttccccagccagctcctccgtcccgtccacctcatcg
cgccagtacacgcggcaacgcatcactcgcgtcaacctcagggacttaattttctacatg
gagcaggagagagagaccgcccactccctcctcctttaccgtgccctgctcaagtag
DBGET
integrated database retrieval system
