Seriola lalandi dorsalis (Yellowtail amberjack): 111672573
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Entry
111672573 CDS
T06058
Symbol
trim54
Name
(RefSeq) tripartite motif-containing protein 54
KO
K10653
tripartite motif-containing protein 54
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
111672573 (trim54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
slal04121
]
111672573 (trim54)
Ubiquitin system [BR:
slal04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
111672573 (trim54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
zf-B_box
RING_XB3-XBAT31
zf-C3HC4_4
zf-RING_5
zf-C3HC4_3
zf-RING_6
zf-RING_2
Cep57_MT_bd
Sina_RING
CC_BshC
DUF5799
Aldedh
Motif
Other DBs
NCBI-GeneID:
111672573
NCBI-ProteinID:
XP_023285784
LinkDB
All DBs
Position
Unknown
AA seq
370 aa
AA seq
DB search
MNFALSFKPPSAGRSGPGGGGGATMENLEKQLICPVCLEMFSKPVVILPCQHNLCRKCAN
DIFQSANPLWHSRGSSGIAASGGRFRCPSCRHEAVLDRHGVYGLQRNLLVENIIDIYRQQ
ETSRLVNMKPEQQQQQQQLMCEEHEEEKINIYCLSCQTPTCSMCKVFGQHKDCDVAPLSS
VYMRQKTDLSDGIAILVASNDHIQAVISQMEEMYRTVEENGQRQREQLESHFHGLVAILE
ERKQELVGLISKQQDNKLKHVRSLIRRHGDHLEAAVTLVESAIQSMEELHMPLFIQSAKV
ILEKMAVTAGASDMERPELSYQSMSHFVIDTDDLADMLRNMDFCSGVGDDGEKDPEEVGG
ESELDFGSRY
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcgccctcagcttcaagcccccgtcagcaggccgctctgggcccggaggcggc
ggcggagccaccatggagaacctggagaagcagctgatctgccccgtctgcctggagatg
ttctccaaacccgtggtcatcctgccctgccagcacaacctctgccgcaagtgtgccaac
gacatcttccagtcggcgaaccctctgtggcattcccgcggctcctccggcatcgctgcc
agtggcggccgcttccgctgcccgtcgtgtcgccatgaagcggtgctggaccgccacgga
gtctacggcctgcagaggaacctgctggtggagaacatcatagacatctacagacagcag
gagacctccaggcttgtaaacatgaagccagagcagcagcagcagcagcagcagctgatg
tgtgaagaacacgaggaggagaagatcaacatctactgtctgtcgtgtcagacgccgacc
tgctccatgtgcaaagtgtttggacaacacaaagactgtgacgtggctccgctcagcagc
gtctacatgaggcagaagacagatctgagcgacggcatcgccatcttggtcgccagtaat
gaccacatccaggcagtcatctctcagatggaagaaatgtaccgcactgtagaggagaac
ggtcagcggcagagagagcagctggagagccacttccacggtctggtggccatcttggaa
gagcggaagcaggagctggtgggtctgatctccaaacagcaggacaataaactgaaacat
gttcgatccctcatccgtcggcatggcgatcacctggaggccgcggtcacgctggtggag
tcggccatacagtccatggaggagctgcacatgccgttgttcatacagagcgccaaagtc
atactggagaagatggcggtgacagcgggggcctctgacatggagcgtccagagctcagt
tatcagagcatgagccacttcgtcatcgatactgacgaccttgctgacatgttgaggaac
atggacttctgctcgggtgtgggagatgacggagaaaaggaccctgaagaagtgggaggg
gagtcagagctggactttggcagcagatattaa
DBGET
integrated database retrieval system
