Seriola lalandi dorsalis (Yellowtail amberjack): 111672635
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Entry
111672635 CDS
T06058
Name
(RefSeq) LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 1B-like
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111672635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
slal03000
]
111672635
03021 Transcription machinery [BR:
slal03021
]
111672635
03036 Chromosome and associated proteins [BR:
slal03036
]
111672635
Transcription factors [BR:
slal03000
]
Eukaryotic type
Helix-turn-helix
ARID
111672635
Transcription machinery [BR:
slal03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
111672635
Chromosome and associated proteins [BR:
slal03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
111672635
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
111672635
NCBI-ProteinID:
XP_023285885
LinkDB
All DBs
Position
Unknown
AA seq
2114 aa
AA seq
DB search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NT seq
6345 nt
NT seq
+upstream
nt +downstream
nt
atggatgccagcctgggatcagccaccagcaccaccaacaacaaccctcctccaagtggg
accagctccgagtttaatcattattatgggaatggaagaggagggccttgctttgatcaa
catggcggacaacaaagcccagggactggggtaacagcggcgctctcggtacacaaaacc
atggaccaggttcagaactcccacgaaggctataacaacaacagcccgtacaaccactac
ccgaactatcgacccggctacgggactagtggatacggaggtatgatgagtccctcacgc
caggggaacaatctgatgggcccgggcagcggtagctcggccgctgctaaccacagcaaa
gcggttatggctgctaccagctccccggctggaggtggaagcggcggcggcaacaccgga
ggatttcagcggtttcctggacagggtcagcagcagcagcacccgtccggggctacaccg
actttgaaccagttattgacgtctccgagcccgatgatgcggggctatggaggtggatat
ccagactataataatccctcagcacagcagcagccgagcatggggttggctaaagacatg
ggttcccagtacggctcggctgctcatggctggggaggacaacaaagaaatcacccggcc
atgagcccggggaataacgggcagggaagcggcaggtcccaggtgccggccatggacccg
atggcgatgaagcgctctcagctctacagtatgagcaacaacccgtactcccagcagcag
cagggggcgccgtaccccggccagccctacggctctccctccccccacagatacccgatg
gggatgcccggcagagggcagatggggatggcagggatgcagtaccctcagcaacagatg
ggatctcagtacagtcagcagcagcagcagcagcagcagcagcagaacattggtggttac
tgtcagccgggccagcccccatacttcagccccccacagcagcagccagctgcccccagc
cagccgccgtacatgcagccccgcccactcccacaacaggaagtgccgcaggaagcgtac
gggggccggggccagtctgccgctatgactcctggtaaaccaaaccatgaggagatgagt
ctgagccaacaggagagaccgtccagcctgccggacttgtccggctcaatcgatgatttg
ccgaccggcactgaggctgcggtgagttcaggggcatcgggatccggcagcactctgggc
gaccaggggactccggcccgttctcctttttccccccatgtatcgcctcgacaccccccg
ccagctcgcaccgggccatcaccctcaccctcaccgtcccccgctgggtccagcagccaa
tcacgatctggaccactgtcccccgccaccagcggaccaggcgctcagttgacccctcag
gtctctggtcctggatcagatgtcggccctcattcctcccagtctgccatgactcaggac
agaggtttccctccttccatgcagcgtagtaccgcagggccccagtttggtcctcagcag
tcagccccacctatgtcccctcacccagcaccgggggggcccatgcaccacggttcctac
cagcagggcagctcatatggccagtatggacccccaggtaactacccccggcccccccac
tatggcggggcccccagtgccaactacagtggcccgggccctggccccagcttagccaac
agcctggggttgaatgccagcagtccgatgcacggtcagggcccctccaccccagcaggt
cgtggcccgggccccggtgcaggggggcgaccctaccctgctggagggagcaccatggcc
cccacctccccgggtatgccacagcccgccggtcagggcatgaggcctccggggcccaac
gcaagtcgcaaactgccagacgtcggccccagtgccgggcccagtgccaactcctcctcc
tcgtccacagctgctgctcagagcaggcctcccttcgctcggtcgcccgtctaccacaac
cagtcctggcccgggggtcgaccttccctctctcctactcttcatccctcccaccctcct
caccctcacccccaccaccaccctcctcttccccaccctcctcaccactcccaacagggc
accaatgctgtgcagaccccccctgagcattatgggcagggcagctacccgggcatggca
ccaatgggaggaatgggctccggaggaatgggctccggaggtcctggaggtcctgcaggt
ccctacacccagcaaccaggcagtaactccgggaggatgacaccacagggaccctcctac
aacaccccgccttcaggtcccatgatgatgccagctgaagggataggtgctcatccagat
accaagcaaagggttgagctcagcaaagagagcgtcggccctgccaccgaaccgcccaaa
cccaaggacagctacagctctcagtgtgtgtctcagccccccaccccctcccccatgtcc
cccagctcagctagtctgtcctcctgtcacggggaggacagtgatagcattagcagccct
gcctggcccaagacaccgaccagccccaaggccagcgtggccaccatgaccaacgagaag
atcactcggctgtacgacatgggctctgagccggagaggcggctgtgggtggaccggtac
ctggccttcatggaggagagggggacacccgtcccgaacctgcccgctgttgggaagaag
ccgcttgacctgtgcagactttacctgtccgtcagagagataggaggcctggccatggtg
aacaagaataagaagtggagggagttatcgtccctgttgaacgtggggacgtccagcagc
gcggccagctctctgaagaagcagtacatccagtacctgtttgcgtatgagtgtaaagtg
gagcgaggagaggagcctccacctgagggcccggggcctgccggagactccaagaaacct
ccgtcactccaggccaagatccagccgccctccccagccaactcgggctccctgcagggc
cccaacacccctcagtccagcagtagctccctgaccgaagcccccggagacctgaagccc
ccgacacctgcctccaccccgcacagccagatgggcccccagcctggaaacaggatcatt
ggaggagtgagcatccaggacccgttttctgaaggcagcgatccagccttccacaacaag
cgaggcccgggacccggcggcgccccttaccaccaagcaggaggtccaacagacccatcc
atgaggatgcagtacgatgccaacaaagacgcgtacggaggactgcggaaaggtccgggg
cccggcgaggccttcggtcccggtcagatgcccagcggtgccatgcaggacatgtaccca
cgcgggccaccctccgggcccctggcagggatgggccccagaccccagtacccctacggc
cccggatatgagcggaggccggaccatgtgatggggcctgaggggggcatggcgcccccc
ggaggtcagaacagcatgggtcagactggaaacgaggctaacatgtaccccaccaacaga
tacccccaccagagacatggacatgacggctatgggcagcagtatcctcatggcatggcc
tacagttcccatcagcccctgtaccctcagcagcagggttacaagcgtccgatggagggg
atgtatcctccctctaagcgtcatgagggggaggggttcggtgtgcagcagtacagctct
cagcagcccgacatgttcggccccccctacggaggtggaggtgggggctacatgggccct
gagcggcggccggtccagggccagtacccgtatccatacagccgggaccgccaggggcct
ccgcagcatggaatgatgggctcaggaccggcgtcagtgtcaggcggacccggggagggg
ccacaggccaacatgtggcaccccaggacagatatgggctacacatacaacagacagggc
caggggcccccctaccccagcataaaccgcgtggatgaccaggagggcagggccccccag
gacagccagtggccccccagtcatccaggccagcgccagccaccatatcccccccactct
tcctcttcctcctcctcctcatccatgccccccctgccatcaagacagcccccctcgtcc
ttccaggccacccccgctgtccctaaccatgtgaaccgctctcacagcccctcctccttc
ccgcggcccctggggggctctctgtcccccaacagcgccccctacctgccctctatgaag
aagccagggctccctggtgtccccccagtccccccgcccactcagggcctccccctcatt
aatagagaggtcacctttccctccagctctgtggaggccaccacccccaaactgaagcca
cgacggaggctcaccgccaaggacacaggaaccccggaggcgtggcgagtgatgatgtca
ctgaagtccggcctattagcagagagcacctgggctctggacaccatcaacatcctgctg
tatgatgacagcaccgtgggctccttcagcctcacacagctgcctggtttcctggagctc
attgtggagttttaccgccgctgcctcatccagattttcgggatcctggaggactacgag
gtgggaaccgaggaccagaggacagtgctggggcccctgcccaacccctccaaggaggag
aaggaggtgctaaaggagccgctggctgccgcctccgagtcttatggccagtcagctgag
gagaagaagatacagaggtcagcggaggagatagaggagacgtcaccgctgctcttgact
gctcccgccatcaatgctgaggaggcaaagatcagcgaaccggttgtcaaagaggaggtg
gaggtgaaggatgagcagaaggagcaggcagcagagccccgcccccaacaggccagcaag
tatgacaagctgccaatcagagtggaggagaggggggaggagtgggaggaggtggaggag
cgctgggccaagctcagccgacccaacggcttcatcagcggcctcctgcactggaaggcc
gggggaggagactccaccgctcacatccagacacactttgaaccctgcacgggagactcc
gcccccccgaacccggcgcagggggaggagagcaggggaggagacgaggagagggaggga
ggaggtcaggaggaagcggagaggaacctgccagccgcggaggaaacgccacctgaaaca
caacaaggctccatgtctgaggtcggaagtcagaggtcaccggctcatggcgagacggct
cagagtcccatcagccagctagaggacgagcctcgctgctgggacgaggctccgctgtcc
acggccgagtcctggcaggactctctggccaaacgctgcgtctgcatctccaacatcgtg
cgcagcctctccttcgtccccggcaacgacgccgtgttgtcgcggcaccccggcctggtg
ctgatcctgggccggctggtgctgctgcaccaccaccacccccgcaggaaacggacaccg
cccacctaccagcgggaggaggagcagggtctggcctgcagccgagacgagtggtggtgg
gactgcctggcggcgctcagggagaacacgctggtgacgctggctaacgtctcgggccag
ctggacctgtcgctgtacccagagagcatctgcctgcccatcctggacgggctgctgcac
tggatggtgtgtccatccgccgaggcccaggaccccttctcctcagcgggcggcttctcc
tcgctcacccctcagagactggtgctggagtgtctgtgcaagctgagtatccaggacagc
aacgtggacctgctgctcgccacgccgcctttcagccgccaacagaagctcttcgccacg
ttagtgcgcctcgtaggtgagaggaagagccaggtgtgtcgggagatggcggtggccgtc
ctgtcccaccttgtgcagggcgactccatagctgcgagggccgtcaccctgcagaagggc
agcgtgggaactctgatcagcttcctggaggacagcgtggccatggctcagtaccagcag
aatccacacagcctgctgcacgccgccacgccaccagagccgcccagcatcaacatgatg
tgccgcgctgccagggcgcttctggccatggcgagggtggaagagaaccggacggagttt
gttctgtacgaaagcaggctgctggacatctcgctgtcggccgccctcaactcctctgtg
gcggccatcatgtgtgaagtactgtttaaaattggccgctcgtga
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integrated database retrieval system
