Seriola lalandi dorsalis (Yellowtail amberjack): 111672717
Help
Entry
111672717 CDS
T06058
Symbol
vps18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04140
Autophagy - animal
slal04142
Lysosome biogenesis
slal04145
Phagocytosis
slal04148
Efferocytosis
slal05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
111672717 (vps18)
04142 Lysosome biogenesis
111672717 (vps18)
04140 Autophagy - animal
111672717 (vps18)
04148 Efferocytosis
111672717 (vps18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
111672717 (vps18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
slal04131
]
111672717 (vps18)
Membrane trafficking [BR:
slal04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
111672717 (vps18)
Hops complex
111672717 (vps18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_solenoid_2nd
VPS18_solenoid_1st
VPS18_RING_C
Clathrin
zf-C3HC4_2
aq_1631
zf-RING_11
zf-RING_16
zf_RING_Vps8
zf-RING_Vps41
zf-RING_UBOX
Apolipoprotein
DUF1664
zf-ANAPC11
DUF5600
zf-rbx1
zf-C3H2C3
RBSN_mid
DUF2175
LETM1_C
zf-RING_5
DUF4446
Motif
Other DBs
NCBI-GeneID:
111672717
NCBI-ProteinID:
XP_023286027
Ensembl:
ENSSLDG00000000311
LinkDB
All DBs
Position
Unknown
AA seq
982 aa
AA seq
DB search
MASILDEYEDSQNTRQSSQQHSRLSSTNIGLAHSGFVNVRLEEEKPIFNKQRIDFTPPEK
INHLAVCNNQLCMSLGKDTLLRIDLAKPDQPNQIELGRKDDSKVHRLFLDPTGSHVLISL
STSECLYLNRNTQKVRSLSRWRGHLIESVGWNKLLGNETSTGPILVGTSQGIIFEAEISA
NEGSLFNTNPDQYFRQVHSLEEDGRPVPVCCMEVERGLENKYFIITTTRKRLFQFVGKVA
EGSEQQGFSSIFNQNQDLLPSFQEFPANMGYSEITFYTSKLRTSPKAFAWMMGNGVLYGQ
LDYVRPDSLLSDVQVWEYTPDIDLNLNKPISIVLTQFHFLLLLHDRVKAICTLNGQVVFE
DVFPDKFGPLKKMIKDPVGGLVWIYTERAVFRYHIQREARDVWQMYMSMNKFDLAKEYCR
DRPECMDMVLAKEAEHCFQNKRYLESAKCYALTQNYFEEIALKFIEAKQEEALKEFLLKK
LNNLKQSERTQITLLVTWLAELYLNSLGQLESDGNSIIFQETRNEFRHFLSSPKHKECLF
NNRSTIYDLLASHGNVDDMVYFSVVMQDYERVISHYCQHDNYCDALEVLSKHCDEKLFYK
FSPVLMQHIPRKVVDAWIQMGKKLDPKKLIPALMNYSQMGSTQQISETIRYMEFCVYELN
VTEEAIHNYLLSLYAKYKPDSLLLYLEQAGTHASEIHYDLKYALRLCAEHGYLRACVLVY
RIMELYEEAVDLALQVDVDLAKSCADLPEDDEELRKKLWLKIARHVVQEEKDVKKAMNCL
SSCNLLKIEDILPFFPDFVTIDHFKEAICSSLEEYNQHIEELKQEMEEATESAKRIREDI
QEMRNKYGVVDSQEKCAACDFPLLNRPFYLFLCGHMFHYDCLFQEVTPHLSAYKQSRLEE
LQKKLAATTQSSKSRHRPVPKDDGDSSSLGKGNAGTSREQMKSDIDDIIASECVYCGELM
IKSIDKPFIDPLKFEEEKSSWL
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaattcttgacgagtacgaggactcgcaaaacacgaggcaaagctcgcagcag
cacagccgcttgtcaagcaccaacatcgggttagcacattcaggctttgtgaatgtgcga
cttgaggaagagaagccgatattcaacaagcaaaggatcgattttactccgccggagaag
ataaaccatcttgcagtctgcaacaatcagctctgcatgagtctgggaaaggacaccctg
ctgaggattgacttggccaagccagatcagcctaaccaaattgaattaggaagaaaagat
gacagtaaagtgcacagactgttcctggaccccacaggctcccatgtgctgatcagcctg
agcaccagtgagtgtctgtacctcaacaggaacacccagaaggtacgcagtctgtcccgc
tggagaggccacctcattgagagcgtgggctggaacaagctgctgggcaacgagaccagc
acaggacccatcctggttggcaccagtcaaggcatcatctttgaggctgagatctctgca
aatgagggcagcttgttcaacaccaatccagaccaatacttcaggcaggtccactccctg
gaggaggatgggaggccagtaccggtctgctgcatggaggtggagcgtggcctggagaac
aagtattttatcatcaccaccacgcgtaaacgcctgttccagtttgtgggtaaagtggcc
gaggggtcagagcagcaaggcttcagctccatcttcaaccagaaccaggacctgctgccc
agtttccaggagttcccagctaacatgggctacagcgagatcaccttctacacctcaaag
ctgcggacctcccctaaggcatttgcctggatgatgggtaatggagttctttatggtcag
ctggactatgtcaggcctgattctctgctgagtgatgtgcaggtatgggagtacaccccg
gacatcgacctcaatctcaataagcccatctccattgtgctgacacagttccacttcctt
ttgttgctccatgacagagtgaaggccatctgcactctgaatggacaggtggtatttgag
gatgtgttccctgataaattcggccctctcaagaagatgatcaaggacccagttggtggt
ttggtgtggatctacaccgagcgggcagtgttccggtatcacatccagcgtgaggccagg
gacgtctggcagatgtacatgagtatgaataaatttgatctggctaaggagtattgccgt
gaccggcctgagtgcatggacatggtgctggccaaggaggctgaacactgcttccagaat
aagcgatacctggagagtgccaagtgctatgcgctgacacagaactactttgaagagata
gcactcaagttcatcgaagccaaacaagaggaagccctgaaggagttcttactgaagaaa
ctaaataatttgaaacagagtgagagaacgcagatcaccttgctggtcacatggctagca
gagctctacctgaacagccttggccagctggagagtgatggtaacagcatcatcttccag
gagacccgtaatgagttccgccacttcctcagcagccctaaacacaaggagtgcctgttc
aacaaccgcagcactatctacgacctgctggccagccacggaaatgtggacgacatggtt
tacttctcagttgtcatgcaggactatgagagagtgatatcccactactgccaacatgat
aactactgcgatgctctggaggtgctctccaagcactgtgatgaaaagcttttttacaag
ttctcccccgtcctcatgcagcatattcccagaaaagtggtagatgcgtggattcagatg
ggcaagaagctggacccaaagaagctcatcccagctctgatgaactacagccagatgggc
agtactcagcagatcagtgaaaccatccgctacatggagttctgtgtgtacgagctcaat
gtgacagaggaggcaatccataactacctgctgtcactctatgctaagtataagccggac
tctctgctgttgtatctggagcaggcaggtacacacgcctcagagatacactatgacttg
aagtatgctctcaggttgtgtgctgaacatggctacctccgggcctgtgtcctggtttat
aggatcatggaactttatgaggaggcagtggatcttgcattacaagtagatgtagacttg
gccaagtcatgcgctgacctaccagaggatgatgaggaactgaggaaaaaactttggttg
aagatcgcccggcatgtggttcaagaggagaaagatgtgaagaaagccatgaactgtctg
tccagctgcaacctgcttaagattgaagacatcctgcccttcttcccggacttcgtcacc
attgaccacttcaaggaggccatctgcagctccctggaggagtacaaccagcacattgag
gagctgaagcaggaaatggaggaggctacagaaagcgctaaacgcatcagagaagacatt
caagaaatgaggaacaaatatggtgtagtggattcccaagaaaagtgtgctgcttgtgac
tttccattgctcaacaggcccttctacctattcctgtgtgggcacatgttccactatgac
tgcctgttccaggaagtgacccctcacctgtcagcctacaagcagagtcgcctggaggag
ctgcagaaaaagctggctgcaaccacgcaatcctccaagtcacgccaccgcccagtgccc
aaggatgatggagattcttccagcctgggaaagggcaatgcaggcacaagccgggagcag
atgaaatctgacattgatgacatcattgcatctgagtgcgtgtactgcggcgaactgatg
atcaaatccatcgacaagcctttcattgatccactgaaatttgaggaggagaaatccagc
tggctatga
DBGET
integrated database retrieval system
