Seriola lalandi dorsalis (Yellowtail amberjack): 111672943
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Entry
111672943 CDS
T06058
Symbol
vps8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
111672943 (vps8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
slal04131
]
111672943 (vps8)
Membrane trafficking [BR:
slal04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
111672943 (vps8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
TPR_Vps41
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_1st
TPR_VPS8_2
Clathrin
zf-RING_Vps41
zf-RING_UBOX
zf-RING_11
zf_RING_Vps8_fungal
zf-RING_5
zf-RING_2
ANAPC4_WD40
Beta-prop_WDR5
zf-C3H2C3
zf-rbx1
zf-C3HC4
Beta-prop_EML_2
WDR55
Beta-prop_WDR3_1st
Beta-prop_HPS5
EIF3I
Motif
Other DBs
NCBI-GeneID:
111672943
NCBI-ProteinID:
XP_023286305
Ensembl:
ENSSLDG00000016762
LinkDB
All DBs
Position
Unknown
AA seq
1404 aa
AA seq
DB search
MSESPDARSLLSASSQLNLMEVDVIDDKEFDIPQVDTPPTLESILNELEDEEEPFVLEDT
CVLSTDNMDAHSCDTSSLASSDSGDPTHLKRKRRTVDLNTTVHGSVLRHSLLKGISAQIV
SAADKVDAGLPTAITVSGVIAVGTSHGLALVFGKDTNQALRLCLGTKMTGAEFGAVSALS
INHDCSRLLCGFAKGQITMWDLANGKLLRTISDAHPPGTAILHVKFTDDPTLAVCNDSGG
SVFELAFRRVMGMRSCDSRCLFSGSKGEVCCIEPLRAPPDIRDHPITHYSLLAMASLTKI
LVIGLKPSLKVWMTFPHSKSDPSSVPQLAWQFVPVQKTVNPVLAFCKGDTVHFLLVKKEE
SGTIHVIKQRQLHLSCDIISLSWINSRTLVLVDSHEKLHIVDRPSQEVLETLDLEQVQLV
YNSRHFKSLATGGNVSQALALVGEKACYQSVSSYAGQIVYLGTKSAHIMTLRNWRERIDC
LLKQEHFVEALSLAWSFHEGTAKAVVGLFGDPIKRKGVVDDKMVEILCQFAEHSLKKCPE
QGKIQVMEQHFHDVVPVMVDYCLLLQREDLLFNQLYARLVENMVAKGVFLEALESYIVAD
RLGHLTTPIMRDLLAHYHGNGMMDSLERCIVHLDVTSLDIQQVVQVCWENQLYDAMIYVF
NSGMNDYITPMEKLFAVIGPPLREGRSLTDEEVVMGNKLLVYISCCLAGRAYPLGDIPED
LVVQVKNQVFEFLIRLHSAESSEEEEVFPFIRTLLHFDTREFLNVLAMTFEDFKNDKQAL
EYQQRIVDILLQVMVDNPDFTPSQVGGLFTFLARQLAKPDNTLFVNRKLFDQVLEFLCCP
DDDSRHTERQQVLLELLQVGGAVQFNEGRLLALAEKAKFYQICECLYEKQHLYDRIVDCY
LRDPLRKVEIFSYIHNLLSMPGYSPEEQQTVKDKVLQHVQELVTLDPSRSADMVVFHFTE
EVQQIISELKDDQLLFHFLSCLLEPREGHHSGTVLPLERDLHKLLLDLLCRFAPQQLLSF
LQTSQYYRLEEAIQTTEKYHHSEATAYLLEKKGDVHGAFSVLLETLKDELCLLTAEKETG
TEGGHGEDENPRDSTLTRVKDSLSDIIALCHRNSHNLYQQQREALWFPLLETMMASQKLV
KGFDSKYTSEVLKELTMKVLNCMSCFISLPAIIQRILQDPVYGKGKLAEIQGLILGMLDT
FNYEQTLLETTTSLLNHDLHWSLAHLRAAVTRGLHPRQDYCNICLQQYKRRQDSAEEIIV
FSCGHLYHFQCLQQKDCGWGISLELQQRWSCYKCSSSQGGRSGASTEPKKGRSTSLAQTR
VTSMHHDAGAEVHRKKVFVEVTLDLQQEQSWDQLRSLYRGPSRLSILSDLSLCHSSEMSG
FLLPVHPGTETFQLKLSPPPLLEE
NT seq
4215 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagtctccggacgcccgcagcctgctctctgcctcctcccaactcaacctgatg
gaggtagacgtgatcgatgataaggagtttgatattccccaagtggacacaccccccaca
ctggagagcatcctcaatgagctggaggatgaggaggagccattcgtgttggaggacacc
tgtgtgctcagcacggacaacatggatgctcactcctgtgacacgtcctctctggccagc
tctgacagtggagacccaacacaccttaaacgaaaacggaggacagtggatctgaacacc
acagttcatgggtctgttcttcgacacagtcttttgaaaggaatctctgctcagatcgtc
tctgctgctgacaaagtggacgcaggactgccgactgctataacagtgtctggtgtgatt
gctgtggggacgtctcatggtctggctctggtctttggaaaagataccaaccaggccctg
cggctctgtttgggtaccaagatgacgggggctgagtttggagctgtgtccgctctcagc
atcaaccacgactgctcacgacttctctgtgggtttgccaaaggacagattaccatgtgg
gatctagccaatgggaaacttctgaggactatcagtgatgctcaccctccagggacagcc
atattacatgtgaagttcacagatgacccaactcttgccgtgtgtaatgacagtggagga
tcagtgttcgagttggccttcaggagggtgatggggatgcgatcctgtgactctcggtgt
ctcttcagtggctctaaaggggaggtctgctgtattgaaccactgcgtgctcctccagac
atcagagaccatcccatcacacactactcattgctggctatggcctctctcactaaaatt
ctggtcattggactaaagccctccctgaaagtctggatgacctttccccacagtaagtct
gacccgtccagtgttcctcagctggcctggcagtttgttcctgtccagaagacagtcaac
ccagtcctggcattctgtaaaggagacacagtccacttcctcctggtgaagaaggaggag
tcggggaccattcatgtcatcaagcaaagacagctccacctcagctgtgacatcatcagc
ctgagttggattaacagtcgcacactggtcctggtggacagccatgaaaaactgcacatt
gtggaccgtcccagtcaggaggttttggagactctggacttggagcaggtgcaactggtc
tataacagccgacatttcaaatcgctggccactggagggaatgtctcccaggctctggct
ttagttggagaaaaggcctgttaccagtccgtctcaagctacgcaggacagatcgtctat
ctgggcaccaagtcggctcacatcatgactctaaggaactggagagagcgtatagactgt
ctgctgaagcaggagcacttcgttgaggcactctctttggcctggtccttccatgaggga
actgctaaggctgtggttggcctttttggagatcccataaaaaggaagggagtggtagat
gacaagatggtagagatcctttgccaatttgcagagcattctttgaagaaatgtccggaa
caaggcaagatccaagtgatggagcaacatttccacgatgtggttccagtcatggtggat
tactgcctcctgctacagagagaagacctgctgttcaaccagctgtatgctcggcttgtg
gagaacatggttgctaagggtgtttttctggaggcgctggagtcatacattgtggcggac
cgccttggtcacctcaccacacccatcatgagggacctcctggctcattaccatggcaat
ggtatgatggacagcctggagagatgcattgtccatctggatgtcaccagcctggacata
cagcaggttgttcaagtgtgttgggagaaccaactctatgatgcaatgatctacgttttc
aacagcggcatgaatgattacatcacacctatggagaaactctttgcagtcattggacca
cctcttagggaggggaggagcctaacagatgaggaagtggtgatgggaaacaaacttctg
gtgtacattagctgctgtcttgcaggaagagcgtatccactgggagacatccccgaagac
cttgtggttcaagtcaagaaccaggtatttgagttcctgattcgtctccattcagctgag
tcatcagaggaggaggaggttttcccattcattcgtacactcctccactttgacacccgg
gagttcctcaatgtccttgcaatgacatttgaagactttaagaatgacaagcaggccctt
gagtaccagcagaggatagtggacatcttacttcaggtgatggtggacaacccagacttt
actccgtcccaggtgggcgggctcttcacctttttggctcgacagttggccaagccagac
aacacgctttttgtgaacaggaagctctttgatcaggttctggagttcctgtgctgccca
gacgacgactctcgacacactgagaggcagcaggtcctgctggagctgctacaggtcggg
ggtgcggtccagtttaatgaaggcaggctgttggctttggcagagaaggccaagttctac
cagatctgtgaatgtttgtatgagaagcaacatttgtatgacaggatcgttgactgctac
ctgagagacccactgagaaaggtggagatcttcagctacatccacaacctgctgtccatg
cccggttacagtcctgaggagcaacaaacagtcaaggacaaagtactacagcatgttcag
gagctggtgacccttgaccccagcaggtcagctgacatggtggtgtttcacttcactgaa
gaggtgcagcaaatcatctctgagcttaaggatgaccagctgcttttccacttcctcagc
tgtctcctggagcctcgggaaggccatcattcagggaccgtcctgcctctggaacgtgac
ctccacaagcttctgctggacttactgtgccgctttgcaccccagcagctgctgagcttc
ctccagacctcccagtactacagactagaggaggccatacaaacgacagagaagtaccac
cacagtgaggccacagcctatctgctggagaagaagggggatgttcatggagctttctct
gtcctgttggagacactgaaggatgaactgtgtctcctcactgctgagaaagaaacagga
actgaaggaggacatggtgaagacgagaatcccagagactcaactctgaccagagtgaag
gactcactcagtgacattatcgccctgtgtcaccgcaactctcacaacctctaccagcaa
cagagagaggctctgtggtttcctcttctggagaccatgatggcttctcagaaactagtg
aaggggtttgattccaaatacacctctgaggtgctgaaggagctgacgatgaaggttctc
aactgtatgagctgcttcatctctctgcctgccatcatccaacgaatactgcaggaccct
gtctatgggaaaggaaaactggcagagatccaaggcctcattctgggtatgctggacacc
tttaactatgaacagactttacttgaaacaacaaccagtctgttgaaccatgatctccac
tggtccttggctcacctgcgcgctgctgtcacaaggggactccacccacgacaagactac
tgtaatatctgcctccagcagtacaagaggaggcaggactcagctgaggagatcattgtg
tttagctgtggccacctgtaccatttccagtgcctgcagcagaaggactgtgggtggggc
atttctttagagctgcagcagcggtggagctgctacaagtgttcgtctagccaaggagga
agaagcggggcttccaccgaaccaaagaaaggccgcagcacgtccctggctcagactcgt
gtcacatcgatgcatcatgatgcaggagcagaggttcacaggaagaaggtgtttgttgag
gtgacactggaccttcagcaggagcagtcctgggatcagctacgctctttgtaccgagga
ccatccaggctgtccatcctctcagacctttccctctgccacagctctgagatgtcagga
tttcttctcccagttcacccaggaacagagacattccagctcaaactctctcctccacct
ctgctggaggagtag
DBGET
integrated database retrieval system
