Seriola lalandi dorsalis (Yellowtail amberjack): 111673049
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Entry
111673049 CDS
T06058
Symbol
lmo7
Name
(RefSeq) LIM domain only protein 7 isoform X1
KO
K06084
F-box protein 20
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
111673049 (lmo7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
slal04121
]
111673049 (lmo7)
Ubiquitin system [BR:
slal04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
111673049 (lmo7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4757
CH
PDZ_6
LIM
PDZ
PDZ_2
Motif
Other DBs
NCBI-GeneID:
111673049
NCBI-ProteinID:
XP_023286458
LinkDB
All DBs
Position
Unknown
AA seq
1463 aa
AA seq
DB search
MEWREQSCVSCDEAYLEAQRWIEAVTKKKFGNNDFRSALENGVLLCDLINKIKPGIIKRV
NRLPTPIAGLDNLNVFLKACGKLGLKEAQLFHPGDLQDLSTRVTVKHQETNRRLKNVLIT
IYWLGRRAQCDRFYDGPYLNFKAFEGLLGTALYKALQESSGQKDDNVRDSGFGDSWYSER
EELYQLRGGVGGGSGGGHRRDDSLDSLDSLGSRPHSISSDTTLKGSSEGCCSDTEADSVF
RMAENKDGLSYRRSVVITPKASTQFNQFLPTKDKPSGYVPAPLRKKRAERNEDNRRSWAN
PTYTEDEGTLTRQRQIEESIDGSKSTNDIQVDPTVVRQARYEELQKYREQIKDSDDKWQD
DLSKWKSRRRSVNSDIVKKKEEREKIEQITYGGNRRSSTFKDVQEDRETKGRSSIGSRLG
SLSYLDDNEDVFDRPVIAPRTRTLPARSYTVDTPYFSSEPSEPSLKENEPPAASPATGRA
ASPPASREVESVDGLAGSDTTTTVTRSSLRSSQPPAAAPSQRSPASEYTRTAKTEETATI
VSASSTRQKVPEPRRPLSGARTEAEAPSSGFLHKQQPQLNSMEAKPPGVSRVSASLPRSY
QRSDSARLTSVVAPRPFGTQPSRITSLPRVISMDDSHKRVNGEVDVSKKTSVPSRYRQFV
TSEDDADSSSAHSSEDEEEEEEESQKTAGKSATSAQSVSPAPLPVKSEAPVSPAPAKETS
QENYCEMRINLNQKPNSSRDFGFRAAWDSTGARVTTIQPGSPAEMCQLQAGDEVLTVNGH
QVAEMSYTDWKSCLEEALQEGSLVMDVRRHGKNNWDRDQPSLPFKSHKTINLTSTDHPIL
LGSSDPNTAKSSLDFTSHISKETLTSKEAPAKPVIDVASNGVNGSFREASVTMRNKESEP
LSLKNLKRRSEFFEQGGSGSSVSALVYLCGGSEPAMPDIPVPSITPSSSRWSWDPEEERR
RQEKWQKEQERLLQEKYKRDQEKLQEEWLKAQQEIAKNVVQQQPGSLEVNSHIISPQSPL
FPFNQPTSTLWEEEETERKRKEEQEHQRQAEEKRRREEEERELQRLQEERKRKERQEEEE
RKRREEEELKWQRRREEEREEERRQQEAAEQQRRERERALELQRQQRQWAGSSHGFANVQ
PPLSFTDRAKSKSSPQLDEEEKPQKKGVYVPPGGMAHWLLEEQLRNACDKQARSERAASE
LETERRNILNAMRYREPERVTGGGVGQQSLSYAEQERQQILNEMKKKTPLLTDSSWIRQR
SSNTATSQESDIPSMRRGESLDNLDASYNSWRSSWTPKSNSYVQNYTRPHSALSGSTSFY
SGGSAAQRPASSTLPSSYSMSSLRGGAGTPSAPWSRQTPSPSLSTPSPTTSPEPTSEAGG
PQQRSRSVSGKKICTFCDTPLGKGAAMIIESLGLCYHLGCFKCIDCKSDLGGSEAGAEVR
IRNKQLFCNSCYMRFKTGQPTAM
NT seq
4392 nt
NT seq
+upstream
nt +downstream
nt
atggagtggcgtgaacagtcctgcgtcagctgcgacgaagcctatttggaggcgcagagg
tggattgaggcagtaaccaagaaaaaatttgggaacaacgacttccgatcagcgctggag
aatggcgttctgctgtgtgatctgatcaacaagatcaagcctggtattataaagagggtt
aacaggctgcccacacccattgctggcctggacaaccttaacgtcttcctcaaggcctgc
gggaagctcggactaaaagaagcacagctctttcaccccggagatcttcaggatttatcc
acaagagttacagtcaagcatcaagagaccaacaggaggctgaaaaatgtattgatcacc
atttactggcttggcagaagagctcagtgtgaccgtttctatgatgggccttacctgaac
ttcaaggcatttgagggattattgggcacagcgctatacaaggctctgcaggagtcgtcc
ggtcagaaagacgacaacgtcagagacagcggttttggagacagctggtactcggagaga
gaggagctctaccaactgagaggaggagttggaggaggcagcggcggcggacacaggaga
gacgactccctggacagtttggactctttgggttcccgacctcacagcatttcctctgac
accactcttaaaggcagcagcgagggttgttgcagtgacactgaggcagactctgtcttc
aggatggctgagaacaaggacggtctcagttaccgccgctcggtggtcatcacacccaag
gccagcacccagtttaaccagtttctgcccactaaagacaaaccctcaggctacgtgcct
gctccactaaggaagaaacgggccgaacgcaatgaggacaaccggcgcagctgggccaac
cccacatacacagaggacgaaggcacactcaccagacagcgccaaattgaagagagtatt
gacgggagtaaatcaacaaatgatatccaggtcgaccccaccgtcgtccgtcaggctcgc
tacgaagagctccagaagtaccgcgagcagataaaggacagtgatgataagtggcaggat
gacctgagcaaatggaagagccggcgccggagcgtcaactctgacattgtgaagaagaaa
gaggagcgggagaagatagagcagatcacctacggcggtaacagaaggtccagtaccttc
aaggatgtgcaagaggatagagaaactaaaggaagaagcagcattggcagtcgtctggga
tctctgtcttacctggacgacaacgaggacgtatttgatagacccgtcattgcccctcgt
acccgaacccttcctgccaggagctacactgttgacactccttacttttcgtctgaaccc
tctgagccttctctgaaagagaacgaaccccccgccgcttccccggctactggcagggcc
gcttcccctcccgcttcacgggaagttgagagtgtggacggtctcgcaggcagcgacacc
acgaccaccgtcactcgcagctctctccgcagctcccagcctccagcagctgcaccttca
cagaggagtccggcctcagagtacaccagaacagccaagacagaggagaccgcaaccatc
gtctccgcttccagcacccgacaaaaggtgccagagccaaggcgcccattgtcgggcgca
cggactgaggcggaggccccctcctctggttttctgcacaaacaacaaccacagctcaac
tcgatggaagccaagcctcccggggtgtctcgggtttccgcctccctccccaggagctac
cagagatcggatagcgcacgtctaacctcagttgtcgcgccaaggcccttcgggacccag
ccctcccgcatcacctcacttccccgggtcatttcaatggacgactctcacaagcgtgtc
aacggcgaggtcgacgtttctaagaagacatcagtgccgagccgctatcgccagttcgtg
acctctgaggacgatgctgactccagctcggcccacagcagtgaagatgaggaggaagag
gaggaggagtcgcaaaagacagccgggaagagcgccacctccgctcagagcgtctcacct
gcccctcttccggtcaagagtgaagctccagtcagtcctgctccagccaaagaaaccagc
caggagaactactgtgagatgcggatcaacctgaaccagaagcccaacagcagcagagac
tttggctttcgggcagcctgggactcaactggagctcgcgtcacgaccatccagcctggc
agccccgctgagatgtgccagctccaggccggagacgaggtgctgacggtgaacgggcac
caggtggcagaaatgagctacacagactggaagtcctgcttggaggaggctctacaggag
ggcagcctggtcatggatgttcgccgtcatggcaagaacaactgggacagagatcaacct
tccctgccatttaaaagccataagaccatcaatctgaccagtacagatcatccgatactt
ctaggttcatctgacccaaacactgcaaaatccagtctggatttcacctcacacatttcc
aaggaaacgctgacatccaaagaggcccccgccaagccagtcattgatgtggcttcaaac
ggagttaatggaagtttccgtgaggcgtcggtgaccatgaggaacaaagagtcagaaccc
ctatctttgaaaaacttaaaacggaggtcagagttttttgaacaaggcggctcagggtcc
agtgtcagtgcgctggtctacctctgtggaggatcagagcctgcaatgccagatatacct
gttccttcaatcactccctcctccagccgctggtcttgggacccagaggaggagcgcaga
agacaagaaaaatggcagaaggaacaggagcgcctcctacaggagaaatataagcgtgac
caggagaaactgcaggaggagtggctgaaggctcagcaggagattgccaaaaacgtggtc
caacagcagcctgggagcctggaggtgaacagccacatcatcagcccacaatcgcccctc
tttccattcaaccagcccacttctactctgtgggaagaagaagagacagagagaaagagg
aaggaggaacaggagcaccagaggcaggcggaggagaagaggaggagggaggaggaggag
cgagagttgcagcgtctccaggaggagaggaagaggaaagaaaggcaggaggaggaagag
aggaagaggagggaggaggaagagctgaaatggcagaggaggagagaggaggagagggag
gaggagaggaggcagcaggaggctgcagagcagcagcgcagagagcgggagagagcgctg
gagctgcagcggcagcagcgccagtgggctggtagctcccatggctttgccaatgtccag
cctccactgtcctttacagacagggcaaaatccaaatcatctccccagcttgatgaagaa
gaaaagcctcagaagaaaggtgtgtatgttccgccgggaggcatggctcactggctgctg
gaagagcagttgaggaatgcgtgtgacaagcaggcccgcagtgagagggctgcgtcagag
ctggagacggagaggagaaacatcctcaatgccatgagatacagagagccggagagagtg
acgggcggtggagtgggtcagcagtccctgtcgtatgctgagcaggagaggcagcagatc
ctgaacgagatgaagaagaaaactccactcctgacggacagcagctggattcgccagcgc
tcttccaacaccgccaccagccaggagagtgacataccatccatgcgccgaggtgagtct
cttgacaacttggatgcctcctacaactcctggcgctcatcatggacacccaaaagcaac
tcttatgtccaaaactacacccggcctcactcagccctctccggcagcacttccttttac
agtggcgggtctgcggcccagcggcccgcttcctccactctgccctcctcctactccatg
agctccctccgtggcggggcgggaactccctcggccccctggtcccggcagacaccttcc
ccgtcactctccactccttcacccaccacctctccagagcccacgtctgaggctggtggc
cctcagcagcggagcaggtcagtgagtggcaagaaaatctgtacgttctgtgacaccccg
ctgggaaagggagcggccatgatcatcgagtcccttgggctctgttatcatttgggctgt
tttaagtgtatcgactgtaagtctgacctcggaggatcggaagcaggggctgaagtcaga
atacgaaacaaacagctcttctgtaactcctgctacatgcgattcaaaactggccagcca
accgctatgtga
DBGET
integrated database retrieval system
