Seriola lalandi dorsalis (Yellowtail amberjack): 111673057
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Entry
111673057 CDS
T06058
Symbol
ptbp2
Name
(RefSeq) polypyrimidine tract-binding protein 2 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
slal03041
]
111673057 (ptbp2)
Spliceosome [BR:
slal03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
111673057 (ptbp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
GlcNAc-1_reg
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
111673057
NCBI-ProteinID:
XP_023286478
Ensembl:
ENSSLDG00000019700
LinkDB
All DBs
Position
Unknown
AA seq
518 aa
AA seq
DB search
MDGIGDVAVGVKRGSDELSMYNSPNSGMSSISDGASNGSDSKKLRVEEAPPSRVLHIRKL
PNEASETEVIALGLPFGKVTNILTLKGKNQAFLEMGTEEAAITMVNYYTTVTPHIRNVPV
FIQYSNHKELKTDAGNQRTQAVLQAVSAVQSGGSPSSDVQEALAAASSPVLRIIIDNMFY
PVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFSDPVNAQQAKLALDGQNIYNSCCTL
RIDFSKLVNLNVKYNNDKSRDYTRPELPAGDGQPSIDPSVAAAFSKDSNSLLGKIPGALN
PLSAAAAAAAAAGRVALAGQTGSSGVLLVSNLNEEMVTPQSLFTLFGVYGDVQRVKILYN
KKDSALIQMSDANQAQLAMSHLNGQKMYGKIIRVTLSKHQTVALPRDGLDDQGLTKDYAN
SPLHRFKKPGSKNFQNIFPPSATLHLSNIPQDVTEDDLRLLFSNAGGTVKAFKFFQDRKM
ALIQMSTVEEAIQALIDLHNYNMGGNQHLRVSFSKSTI
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggacggcatcggtgatgttgcagttggagtgaagagaggatcagatgagctgagtatg
tacaacagtcccaactctggcatgagcagtatcagtgacggggcttccaatggcagcgac
agtaaaaagctcagggtggaggaggcccctccatctcgtgtgctccacatcaggaagctg
cccaacgaggcctcagagactgaagtcatcgccctcggtttgccttttggcaaagtcacc
aacatcctcacactaaagggaaagaaccaggcgttcttggagatggggacggaggaggcg
gccatcactatggttaactactacaccacagtaactcctcatatccgcaacgtccccgtc
ttcattcagtactccaatcacaaagaactcaaaactgatgctggcaatcagcggactcag
gcagtgctgcaggcggtgtcagcggtccagtccggtgggtcgccgagctcagatgttcag
gaggctctggccgcagcctccagtcccgtgctgcggatcatcatcgacaacatgttctac
cctgtaacgctggatgtgctgcaacagattttctctaagttcggcacagtcatgaagata
atcacatttactaagaacaatcagttccaggctcttctacagttcagtgatcctgtcaac
gcacagcaggccaaactggcgctggacggccagaacatctacaactcatgctgcacgctg
cgtatcgacttctccaagctcgttaatctgaacgtcaagtacaacaacgataagagtcgt
gactacacgcggcccgagcttcctgctggtgacggccagcccagcatcgacccctcggtg
gccgccgccttcagcaaagactccaactccctcctcggtaagatcccaggagccctgaac
cctctgagcgccgcagcagcagctgctgctgctgcagggagggtggccctggctggacag
acagggtccagcggggtcctgctggtcagcaacctcaacgaggagatggttacgccccaa
agtctgtttaccctcttcggagtgtatggggatgtccagagggtgaaaatcctttacaat
aagaaggacagcgctctcattcagatgtcggacgccaaccaggcccagctcgcgatgagc
cacctgaacggccagaagatgtacgggaagatcatccgggtgacgctgtctaagcaccag
acggtggcgctgcctcgcgacggcctggacgaccagggcctgaccaaagactatgccaac
tccccgcttcaccgcttcaagaaacccggctccaagaatttccagaacatcttcccaccc
tctgccaccctccacctctccaacatcccacaagatgtgacggaggacgacctgcggctg
ctcttctccaacgctggaggcactgtgaaagcattcaagtttttccaggatcgtaaaatg
gctttgatccagatgtcgacggtggaggaagcgatccaggccctgatcgaccttcacaac
tacaacatgggaggcaaccagcacctgagagtctccttctccaagtccaccatttga
DBGET
integrated database retrieval system
