Seriola lalandi dorsalis (Yellowtail amberjack): 111673337
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Entry
111673337 CDS
T06058
Symbol
col8a2
Name
(RefSeq) collagen alpha-2(VIII) chain
KO
K23455
collagen type VIII alpha
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C1q
PA14
BclA_C
Motif
Other DBs
NCBI-GeneID:
111673337
NCBI-ProteinID:
XP_023286859
Ensembl:
ENSSLDG00000006572
UniProt:
A0A3B4WVX6
LinkDB
All DBs
Position
Unknown
AA seq
688 aa
AA seq
DB search
MLVTMLLAPVCVLLMLGGRALAGGYPPIPHVKYMQPMMKGPIGPPFREGKGHYVDMPPMM
EVKGEPGPQGKPGPRGPPGPPGLPGKPGLGKPGLNGQVGPQGPPGFPGIGKPGLPGLPGK
IGPKGMSGFNGEVGPRGEPGPRGPPGQPGLPGPAGLSLNGKPGLPGIRGPPGSRGEPGIK
GISGPPGDRGLKGENGNGKTGPPGIRGPPGLKGSTGPPGIPGIGKPGPKGLPGLPGLKGD
YGLPGDRGEPGEGGAPGLQGLPGPVGLGKPGLDGLPGAPGPLGPKGEAGGRGPPGFPGTP
GYGKPGLSGPKGEKGHGGLPGLPGDKGDQGMVGPIGEPGLDGQPGPAGLQGPMGLPGKHG
MPGQKGELGPQGPPGLPGLRGDQGPSGHAGKPGIPGEKGIPGLNGPFGKPGPKGEAGHIG
LPGNPGLTGAPGSKGETGFIGTPGPRGQSGIPGLQGPMGPMGPQGAPGPKGEPGLPGSPG
LGKFGEKGSIGPQGPPGKPGPVGLNGNPGPPGLPGPPGPPGNGQTVVAGPTDTQLEGDEV
PGDRKGSVYSQVPLSASVAPAFTAILTTPFPPSGMPIKFDRTLYNGQNAYSSATGMFTAP
LSGVYYFAYHMHVKGTSLWVALYKNNVPATYTYDEYKKGYMDQASGSAVLELKEGDQVWV
QMPSDQANGLYSTEYIHSSFSGFLLCPT
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgctggtgaccatgctgttggctcctgtctgtgtgctactgatgctgggggggcgtgct
cttgccggaggctatccccccataccccacgtgaagtacatgcaacccatgatgaaaggg
cctatcggacctccatttcgagagggcaaggggcattatgttgatatgccacccatgatg
gaagtgaagggggaaccaggcccccaaggaaaacctggaccaaggggcccacctgggcca
ccaggacttccaggaaaacctggactaggaaagccaggtctcaatggccaggtaggccct
caggggcctcctggctttccaggaattggtaaacctggactaccaggtcttccaggaaag
attgggccaaaggggatgtcagggtttaatggtgaggttggccctcgtggtgaaccaggt
cctagaggtcctccagggcagcctggcctccctggcccagctggcctgtctctgaatggg
aaacctggacttccaggcatcagaggcccccctgggtctcgtggagagccaggaataaag
ggtatttctggtccaccaggtgaccgtgggcttaagggcgagaatggaaatgggaagact
gggcctccaggtataaggggtcctcctgggctgaaaggcagtacaggaccacctggtatt
ccaggaataggcaagccaggaccaaaaggtttgcctggactgcctggtcttaaaggtgat
tacggactaccaggggatcgtggagaaccaggagagggtggggccccaggtctacaaggt
ctcccagggccagttgggttagggaagcctgggctagatggattgccaggagcaccaggt
ccactaggaccaaaaggtgaggcaggaggtaggggtcctcctggatttcctgggactcct
ggctatggaaaacctggtctgagtgggccaaaaggagaaaagggccatggtgggttgcct
ggacttccaggggacaaaggagatcaaggaatggtaggcccaattggggagccagggctt
gatgggcaacctgggccggcaggacttcaaggcccaatgggacttccaggaaaacatgga
atgccaggacagaagggagagctggggccccagggccctccgggactgcctggcctcaga
ggtgaccaaggccccagcggacatgctggaaaacctggcatccctggggaaaaaggcatc
cctggacttaatggtccgtttggaaaacctggacccaaaggtgaagcaggtcatattggc
ctacctggaaatccagggctgacgggtgctccagggtctaaaggtgagacagggttcata
gggactccgggccccaggggccagtcaggcattcctggtcttcaggggcccatgggtccc
atggggccacagggtgctcctggcccaaagggtgaacctggacttccagggtctccagga
ctgggtaagtttggagagaaggggtctataggtccccagggtcctccaggaaaaccaggc
cctgttgggcttaatggtaaccctggcccccctgggctaccagggccccctggtcctcca
ggaaacggccaaacagttgttgcagggccaacagatacacagttggaaggggatgaagta
ccaggggacaggaaggggtctgtgtacagtcaagttcctctctctgcctctgtagcacca
gccttcactgccatcctcaccacacctttccctccctctggtatgccaatcaaatttgac
aggaccctgtacaacgggcaaaatgcctacagctctgctactggcatgttcactgctcct
ttatctggtgtttactactttgcgtaccacatgcatgtaaagggaactagcctgtgggtg
gcactgtacaagaacaatgtaccagccacctacacatatgatgaatacaagaaaggctac
atggaccaggcgtctggtagtgctgtcctagagctgaaggagggtgaccaggtatgggtc
cagatgccctcggatcaggcaaacggcctctattctaccgagtacatccactcctccttc
tcaggattcctgctctgtcccacataa
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