Seriola lalandi dorsalis (Yellowtail amberjack): 111673358
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Entry
111673358 CDS
T06058
Symbol
rfc2
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03030
DNA replication
slal03410
Base excision repair
slal03420
Nucleotide excision repair
slal03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
111673358 (rfc2)
03410 Base excision repair
111673358 (rfc2)
03420 Nucleotide excision repair
111673358 (rfc2)
03430 Mismatch repair
111673358 (rfc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slal03032
]
111673358 (rfc2)
03036 Chromosome and associated proteins [BR:
slal03036
]
111673358 (rfc2)
03400 DNA repair and recombination proteins [BR:
slal03400
]
111673358 (rfc2)
DNA replication proteins [BR:
slal03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
111673358 (rfc2)
DNA Replication Termination Factors
ELG1-RFC complex
111673358 (rfc2)
Chromosome and associated proteins [BR:
slal03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
111673358 (rfc2)
DNA repair and recombination proteins [BR:
slal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
111673358 (rfc2)
Check point factors
HRAD17(Rad24)-RFC complex
111673358 (rfc2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
nSTAND_NTPase5
AAA_lid_RFC1
AAA_22
RCF1-5-like_lid
AAA_14
AAA_16
Viral_helicase1
Mg_chelatase
AAA_11
Rad17
RuvB_N
AAA_19
nSTAND3
DEAD
MipZ
AAA_5
AAA_assoc_2
AAA_18
AAA_24
ABC_tran
AAA_30
DNAX_ATPase_lid
MeaB
AAA_25
AAA_28
RNA_helicase
NTPase_1
AAA_23
SLFN-g3_helicase
AAA_2
MCM
FtsK_SpoIIIE
bpMoxR
DUF815
Motif
Other DBs
NCBI-GeneID:
111673358
NCBI-ProteinID:
XP_023286881
Ensembl:
ENSSLDG00000010335
LinkDB
All DBs
Position
Unknown
AA seq
357 aa
AA seq
DB search
MDVEMAEPERVQKPTESGPKTGTEAGESSSKSSGGAYELPWVEKYRPLKLNEIVGNEETV
SRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGASMKDAVLELNASNDRGIDVVR
NKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRIMEIYSKTTRFALACNASDKI
IEPIQSRCAVLRYSKLTDGQILARLQEVVEKERLSVSDDGLEAVIFTAQGDMRQALNNLQ
STNSGFGYINSENVFKVCDEPHPLMVKSMLGHCVDGKIDQAYKVVEQLWALGYSPEDIIG
NIFRVCKTYQMAEYLKLEFIKEIGYTHMRVAEGVNSLLQMAGLLGRLCSKTTPPAAS
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggagatggcggagcctgagcgtgtgcagaaaccgacagaaagcgggccaaag
acgggcacggaggctggggagagttcgtctaaaagctctggcggcgcctacgagctgccc
tgggtggagaaataccgtccactgaagctgaacgagatcgtagggaacgaggagacagtg
agccggctggaggtgttcgcaagagagggaaacgtccccaacatcatcatcgcaggtcct
cccggcacaggaaagaccaccagcatcttgtgtttggcccgagcgctgctgggagcctcc
atgaaggatgccgtgctggagctcaacgcttcaaatgacagaggaattgacgtggtgagg
aacaagatcaagatgtttgcgcagcagaaagtcacactgcccaaaggacgacacaagatc
atcatcttggatgaagccgacagcatgacggatggagctcagcaggctttgaggaggatc
atggagatctactcgaagacgacgcgcttcgctctcgcctgtaacgcctcagataagatc
atcgagccaatccagtcccgctgcgccgtgctgcgttactccaagttgacggacggacag
atcctcgcccggctgcaggaggtggtggagaaggagcgtctgtctgtgtctgacgacggg
ctggaggcagtcatcttcaccgcacagggagacatgagacaggcgttgaacaacctgcag
tcgaccaactctggcttcggctacatcaacagcgagaatgtgttcaaggtgtgcgacgag
cctcaccctctgatggtgaaaagcatgctgggacactgtgtggacgggaaaatcgaccag
gcctacaaggtggtggagcagctgtgggcgctgggctactctccagaggacattatcgga
aacatcttcagggtctgcaagacctaccagatggccgagtacctcaaactggagttcatc
aaggagatcggttacactcacatgcgggtggctgaaggcgtgaactccctgctgcagatg
gccggtctgctgggtcgactctgcagcaagacaaccccccctgctgccagctga
DBGET
integrated database retrieval system
