Seriola lalandi dorsalis (Yellowtail amberjack): 111673587
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Entry
111673587 CDS
T06058
Name
(RefSeq) VPS10 domain-containing receptor SorCS1-like isoform X1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
slal04131
]
111673587
Membrane trafficking [BR:
slal04131
]
Protein recycling
Others
Others
111673587
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
PSII_BNR
Motif
Other DBs
NCBI-GeneID:
111673587
NCBI-ProteinID:
XP_023287164
LinkDB
All DBs
Position
Unknown
AA seq
1249 aa
AA seq
DB search
METGVIFCPKWHSALWFFILMMFCFFHAFKAEITCRSCQPGNKWHAQELLLKFDRSEFSA
GLKGEVFGHGDGEGRAGAASAESRRLRCTAGRDDCAPAGAGDTESRLKRNTGNLRAKDET
GESEFSKIKVSYVETSGQQRSSDGAGFTRYRKRTRRDSADEKVRPPGSAQSQDPGEGTGQ
AARRRVTRSELRWSGEERRAGGQRQEELKLNSSTFALTGDSSHNQAMVHWSGQNSSVILM
LTKLFDFNLNSVTESSLWRSTDYGATYQKLNDKVGVKTILSYLYVSPNNKRKIMLLTDPE
VESSLLISSDEGATYQKYRLNFYILSLLFHPEQEDWILAYSHDQKLYSSVEFGRRWQLVH
ERVAPNRFYWSKMGLDKEPGLIHLETSISEGQALYVTCKLQNCTDANKGKPFPGYIDPNS
LVVQDEYVFVQVSTAGRPIYYVSAKRDVFTPMKLPKYTLPKDLHVISTDENRVVAAVQEW
NQNETYNLYVSDTLGVYYTLALENVVSSMGPEGNVMVDLYEVAGIKGMFLANKKMDNQVK
THITYNRGRDWRLLQAPSKDLRGNSIHCVLPYCSLHLHLHVSANPYTSGNIASRDSAPGI
IVASGSIGSELTTSNVSVYITSDAGNTWRQIFDEEYAVLYLDQGGALVAIRHTPLPIRHL
WLSFDEGRQWNKYSFTNMPLFVDGVLGEPGEETLIMTIFGHVSHRSEWQLVKIDFRSIFN
RRCTEADYQTWHLHNQGEPCLMGVKRIYRKLKPTSRCVMGKTYSVSMTSGPCECTEADFE
CDYGYERRTDGKCTPAFWFHPSSMSRSCSMGMTFLNSTGYRKVVSNNCTAGVSVEYTARR
QQCSIQAPKGLHLVTSEGTLTATLGANVTFLVFLEEGDGARTSITLDFGDGHALTYSNVS
SIEDGIKHIYKAVGIYRVSATGENNLGSETAMLYLHVTCQLEYIHLSAPFVAVRNKEVNL
TAVLWPSQVGTVTYIWWIGNNTEQPVITLEGSVACTFSREGINTVTVQVSAGNTILQDRK
NIAVHEYFRSHLLAFSSNLDDHNPDVAEWRLDVSRVIKNSLIQATGVREDQLLVTVLPGL
PTAAEFFLLPDKQLTEGKPEKSSAHLDQLSEVLLSALNQNLVQFTLRPGVQVTVYAAHLS
AAPLVDTSENHSGSAMLMLLSVVVVGLAVFVIYKFKRKIPGLNVYAQMQNEKEQEMMSPA
NPTETTASSQRDLVHSLEILDTEFNSRPIGCMKPHVHVKFSTELPTYIV
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atggagacgggggtcatattttgccctaagtggcacagtgcgctttggtttttcattttg
atgatgttctgtttttttcacgccttcaaagctgagataacttgcaggtcgtgccagcct
ggaaataagtggcatgcacaggaattactgctgaaatttgacagaagtgaattctcggcg
gggctgaaaggagaagtttttggacacggagacggagaagggagagccggggctgcaagt
gccgaaagtcggcggctccgttgtacggctgggcgcgatgattgcgctccagctggggcg
ggagacacggaatcaaggctgaaacggaatacaggcaacctgcgcgccaaagatgagacc
ggcgagagcgagttttcaaagattaaagtttcatacgtagaaacgagtggtcagcagagg
agcagcgatggtgccggttttacccgatacagaaagcgcacaaggagggatagtgctgat
gagaaagtcagaccccccggttcagctcaaagtcaggacccgggagagggcaccggccag
gcggctcggcgcagagtgacgcgctctgaattgcgctggagcggcgaggagcggagagcc
ggtggtcagaggcaggaggagctaaaacttaatagttcgacattcgccttgaccggggat
tcatctcacaatcaggctatggtgcactggtccggccagaacagcagtgtaattttgatg
ctcaccaagctatttgacttcaacctcaacagtgtgactgagagttcattatggaggtcc
accgactatggagcaacgtaccagaagctgaatgacaaagtgggagtaaagaccatactc
agttatttgtacgtgagccctaacaacaagagaaagatcatgctgttaactgatccagag
gtggagagcagtctactgatcagctccgatgaaggagcaacctaccagaagtaccggctg
aacttctacatcctcagcttgctcttccacccggagcaggaggactggattctggcctac
agccacgaccaaaagctctacagctcagtggagtttgggaggaggtggcagctggtgcat
gaaagagtggctcctaatcgtttctactggtcgaaaatgggtttggacaaagagccgggc
ttaattcacctggaaaccagcatctctgaaggacaggcactgtatgtcacctgcaagctg
cagaactgcacagatgccaacaagggcaaaccattccccggctacattgaccccaattct
ctggtggtgcaagatgagtatgtgtttgtccaggtgtcaaccgcgggaagaccaatctac
tatgtgtctgctaaaagagacgtctttacccccatgaagctgcccaagtacaccctgccc
aaggacctgcatgtgatcagtacggatgaaaaccgcgtggtggcagccgtgcaggagtgg
aaccagaatgaaacctacaacctgtatgtgtcagacacattgggggtctactacaccctg
gccctggagaacgtggtcagcagcatgggccccgagggcaacgtcatggtcgatctctac
gaggtagcgggaataaaggggatgttcctggccaacaaaaagatggataaccaagtgaag
acgcacatcacctacaacagaggccgagactggaggctgctgcaggccccgagcaaagac
ctgaggggcaacagcatccactgtgtgctgccatactgttcattacatctccatctccac
gtgtctgcaaatccctacacatctggaaacatcgccagcagggactcggcgccggggatc
attgtcgcgtcaggctcaattggctcagagctgaccaccagcaatgtcagtgtgtatatc
acctccgatgccggaaacacatggagacagatcttcgatgaggagtatgcagtgctctat
ctcgaccaaggaggcgccttagttgcaataagacacactccacttcctatccgacacctg
tggttgagctttgatgaaggacggcagtggaacaagtacagcttcacgaacatgcccctg
ttcgtggatggggtgctgggagagcctggggaagagactctcatcatgacgatattcggc
cacgtcagtcatcgctcagagtggcagctggtgaaaatagacttcaggtccatcttcaac
aggaggtgtacagaggcggattatcagacatggcacctccacaaccagggtgagccgtgc
ctcatgggagtgaaaaggatctaccggaaactgaagcccacgtccaggtgcgttatgggg
aagacgtactctgtgtcaatgacgtccggcccctgtgaatgcacagaggctgactttgag
tgtgattatggctacgagagacggaccgatggcaagtgcacccctgccttttggttccat
ccatcatcgatgtccaggagttgcagcatggggatgactttccttaacagcactggctac
aggaaggtggtctctaataactgtacagccggagtcagcgtggagtacacagccaggagg
cagcagtgttccatccaagcacccaaaggtctccacctggtcaccagtgagggcacgctg
acagccacattaggcgccaatgtcaccttccttgtttttctggaggagggcgatggggcg
aggacgagcatcactctggactttggagacggccacgctctgacgtactccaatgtgagc
tccatcgaggacgggattaaacacatctacaaagctgtgggaatctaccgagtgtctgcc
accggggagaacaacctcggctcagagaccgctatgctctacctgcatgtcacatgtcag
ctggagtatatccatctctcagctccctttgtggcggtgaggaataaggaagtgaacctg
accgccgttctgtggcccagccaagtgggaacggtcacctacatctggtggatcggaaat
aacacagagcagccagtaatcaccctagagggaagtgtagcgtgcacgttctcccgggaa
ggtatcaatactgtcactgtgcaggtgtctgcagggaatactattctgcaggacagaaaa
aacatcgctgtccacgaatatttccgatctcatctgctcgccttttcatcaaacctcgac
gaccacaaccctgacgtcgcagaatggaggctcgatgtgagccgagtcatcaagaactct
ctgatccaggctacaggcgtgagagaggatcagcttctggtcaccgtcctcccaggttta
cccactgcagcggagtttttcctcctacctgacaaacagctaacggaggggaaaccagag
aagagctctgctcatttagatcagctctctgaggttttgctcagcgccttgaatcaaaac
cttgtccagttcacgctgcgaccaggggtccaagtcactgtgtatgcagcacacctatca
gcagcgcccctagtggacaccagcgagaaccacagtggctctgccatgctaatgctgcta
tcagtagtggttgtgggtttagccgtgtttgtcatctacaaattcaagaggaagatccca
ggcctcaacgtctatgcgcagatgcagaatgaaaaagaacaagaaatgatgagtccagct
aatccaacagagaccacggccagctcacagcgggacttggtgcattctttggagattctg
gacacagagtttaactcacggcccatcggatgtatgaaacctcatgtacatgtgaaattc
tccacagaactccccacatacatcgtctga
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