Seriola lalandi dorsalis (Yellowtail amberjack): 111673730
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Entry
111673730 CDS
T06058
Symbol
pnn
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03013
Nucleocytoplasmic transport
slal03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111673730 (pnn)
03015 mRNA surveillance pathway
111673730 (pnn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slal03019
]
111673730 (pnn)
03041 Spliceosome [BR:
slal03041
]
111673730 (pnn)
Messenger RNA biogenesis [BR:
slal03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
111673730 (pnn)
Spliceosome [BR:
slal03041
]
Complex C
Other components
EJC/TREX
111673730 (pnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
111673730
NCBI-ProteinID:
XP_023287352
Ensembl:
ENSSLDG00000023420
UniProt:
A0A3B4YIH8
LinkDB
All DBs
Position
Unknown
AA seq
684 aa
AA seq
DB search
MAVAVRSLQDQLEKAKESLKHVDDNIRKLTGRDPNESRPGQIRRLGGPMAGVGGGRGRGV
NLLRRSLSDIGSGGPPAKQRDIEGALLRLAGDQRARRDARHDSDAEDDDDVKKPALQSSV
VATSKERTRRDLIQDQTMDERGKQRNRRMFGLLMGTLQKFKQESNVSTEKQKRRTEIEQK
LEVQAEAERKKVENEKRELFEERRAKQTELRLLEQKVELAQLQEEWTSHNNRLVKYIRTK
TKPHIFYLPGKMCSATQKLLDDSTKKLNAVFDERREAFAEHLSKMESRPRRQPNRDQDGN
TAATGMDHPAEGKPAGQVVKVTGNKGDAEIEEEEEEDEEEEEREKEGERKVTEKDEREEE
EMGLKKADEEEEQMELIEEGSEKKEGGEGVKGREDQREKGDKEASPGSEEMEVEGEREDR
RKEEVGEINSKQGPIDLQNEKTQETQSSEPTTASQEASDTSQQPQPSPAAGEPTVQSSET
QGASPTPQPQTAAAVPGQDFAIPGLEVQDLAVENQAVEGKAGGEAPQKLPVSHEAPSTTP
ALSKEDEDSGRGRKKEKEPKKGRSHSNSSSSSSSGSSSSGSSSSSSGSSRSSSSSSSSSS
SSSNSSSRSRSRDSGKRKRRPSDRSRDRKKGEDRSHRKRGGSSGGGRDSKGSKERRKRRS
EEGRGRSSRSDREHKDRDRKDKRR
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcggtgcggagcttgcaagaccagctcgaaaaagcaaaggaaagcctaaaa
catgtagacgataatattcgtaaattaaccggacgtgatcctaatgaatcgaggccgggc
cagatccgccggctcggcggccccatggcaggcgtcgggggaggtagaggcagaggagtc
aacctgctcaggcgcagtctctcagacataggaagcggcggcccccctgccaagcagagg
gacatcgaaggagcgctgctgaggctggcgggggaccagagggccaggagagatgcgcgt
cacgacagcgacgccgaggatgacgacgatgtcaaaaagccggcgttgcagtcgtctgta
gtagctacctccaaggagcgaacgcgccgagacctcattcaagatcagaccatggacgag
aggggcaaacagaggaatcggcgtatgttcggcctgctgatggggaccctgcaaaaattc
aaacaggagtccaacgtctctacagaaaagcaaaagcgacgtacagagattgagcagaag
ctcgaggttcaggctgaggcagagagaaagaaggtggagaatgaaaagagggagcttttt
gaagagaggagggccaaacagactgagctgagactactggaacagaaagttgaactggct
cagctgcaagaggagtggaccagccacaataatcgcctggtgaaatacattcgcactaag
acaaagcctcacatcttctatttgcctggaaaaatgtgctccgcaacacagaaactcctc
gatgactccaccaagaaactaaatgctgtgtttgacgagagacgtgaggcttttgccgaa
cacctaagcaagatggagtcccgcccccggcgacagccaaaccgcgaccaggacggcaac
acagcggcaacaggaatggaccacccagcggagggtaagccagcaggtcaggtagtcaag
gtgacaggtaacaagggggatgcagagattgaggaagaggaggaggaagatgaggaggaa
gaggagagggaaaaggagggggagagaaaggtgacggagaaggacgagagggaggaagag
gagatggggttgaagaaggcagatgaagaggaggagcagatggagttaattgaggagggt
agcgagaagaaggaaggaggggagggtgttaagggcagagaggatcagagggaaaaagga
gacaaggaggcaagtccagggtcagaagagatggaggttgagggggagcgtgaggacagg
agaaaggaagaggtgggagaaataaacagtaaacaagggcccatagacctccaaaatgaa
aagacccaagaaacccagtcctctgaaccaaccacagccagccaagaagcatcagacacc
agtcagcagccccagccgagtcccgctgcaggggaaccaacagtgcagtcctctgagacg
cagggggcttctcctaccccacaaccccaaacagccgccgctgtacctgggcaggatttc
gccatccccggccttgaggtccaggacttggcagtggagaaccaggctgtagaagggaaa
gcagggggcgaagccccacaaaaactgcctgtttcccacgaagcccccagcactaccccc
gcactctccaaggaggatgaggacagtgggagagggaggaagaaggaaaaggagccaaag
aagggtcgtagtcatagcaacagctcctcctcttcctcctccggctcatcctccagtgga
agctcctcctcttcctctggatccagccgctcttcttcatcatcatcgtcctcttcatcc
tcgtcgtccaacagcagcagccgaagtcgcagccgagatagcggtaagcgtaagaggagg
ccatcggatagaagcagagacaggaagaaaggagaagacaggagtcatcgtaagagagga
gggagtagcggaggaggaagggactcgaagggatcgaaagagaggaggaagaggaggagc
gaggagggaaggggcaggtcgtctcggagcgatagggagcataaagatagagacaggaag
gacaagaggcgctaa
DBGET
integrated database retrieval system
