Seriola lalandi dorsalis (Yellowtail amberjack): 111673758
Help
Entry
111673758 CDS
T06058
Name
(RefSeq) trinucleotide repeat-containing gene 6B protein-like
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slal03019
]
111673758
03036 Chromosome and associated proteins [BR:
slal03036
]
111673758
Messenger RNA biogenesis [BR:
slal03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111673758
Chromosome and associated proteins [BR:
slal03036
]
Eukaryotic type
Gene silencing
piRNA pathway
111673758
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
RRM_occluded
RRM_1
Motif
Other DBs
NCBI-GeneID:
111673758
NCBI-ProteinID:
XP_023287385
LinkDB
All DBs
Position
Unknown
AA seq
2062 aa
AA seq
DB search
MEDKKKKKEDKKKRETSQKVPEQKIKVPESAKPSCSQPLATPGSVSPSPGPVAPSSPSPG
AAGVSAQVPPGGGNNAKQRTAVANGQPSSSPSGSQSSQQQRYMSREVPPRFRCQQDHKVL
LKRGQPPLSSMLLGGGGGGGGGGEGGTGGGSGWVATPPVSSQGADNPNASTAGGADSNLG
SSSPSPPNSSSSSLCVAALSSSSTTTTSTYANSTWGAGSGSQSSSQGCGKVIVDGTDLED
WPSILGGAKLSSDGAGGGVQEQDCPSNNNNSSASWSERNIQQKGGAVGGGAGNMDNPSPP
RSSPLPSSSSLNECVQSSGGVWGSSTSSQVEAGLGSAAFYNSKVSHLLPGPQESPVGGSS
NVPGANFNPNVNPSAWPALVQGGTSTSASDGLPQHSSITSASSFSASTTLITTHSLSSVN
QTGLHQQHTETAVGARSGEPQQHLGNPGAELGSGGGARGAGPNQEGGDERDCGVASVEEE
GNGNLSGSSSLAASSSWRSMPPVSSDISAGASKADGWGGGGTGAQGQEGNVWGFGSQGEK
AGWGRGNDGGSNTPVVSQGAWEGGSSDAEWGGTAGGVSSSNLAIGSGRGGDGSSSNSSSS
GGSGGIGGSVLQDSASPKLETMTKAWDNQKGMESGDGVVGEWGGGGGVQGGGTGGGGPSS
SSGGGSTAGSGGEGSGSSQKQDRASAVRQRSLQTSNAEVALLSMLNRSDLDPRVLSNMGW
GQTQIRQNVAWDLDTTKGVGNRNERSTSSSSAFSSATMNTTTSRGPGYPSNTSSVTNDPS
SGSHTTSLNSGPATVKEGWDGGATQTTCGPHMPGSTIRKPGMPEEDREGNPGKAAGGWGE
HPPENQGKGWGTEEQQWREHRGGGGNRRDIGEQGSGWADGPEDKGTGGWKGTGRGEAGGW
GGDWGKRDSTPGSGWGSDGRNRGGNNSDEGSSWGNLDEGGSQRGGWGGGDVGGGKSHQDW
GSAKPHTASAQIPNSQVAPMKAPNQQQHQSQGQQPPGGPMQGGWNSRSTVGGGGGGGGGG
PPSKNQNQSSGWTSGPIPQISGGGGETLEPSGWEEPSPQSISRKMEIDDGTSAWGDPTRY
NSKNVNLWDKNSATPSQSHSQPPPPPPSMQQQPPRRQQAMQHSRDTNPGNATVGMWGGGA
QSVDNGTAAWGQTSDAATGWGDPDEPSKASGWGNPSPNPGKPSTKSMESWGGKGEGSVAA
SRHPSWDEEDDGGGGVWNSTGSQGSSSSFNSGGWGQTHGGKRGNIKSGGGDSWMNPVSRQ
FSNMGLLGDDPNDDKKMEVDKRGITDYNGEMRRGGRGGGGYRMPSSKDMGPVDMGPYGEK
MGGHGVFVGSGGGMPPPRGMHQPGMHPMNPSQGLRAQVPHQFLSAQVPGPMLKQMPSPGG
SVGGVVGGVGGVGSVGSVGGVGGVGGVGGGVFPPQISPQQLAMLSNIYPHMQQFHLACQL
LIQQQQQQQQLLQNQRKFPQPQPLRQQPDPQQLARIMAILQQQRQHQQGGVGGAAAGGGS
SKLSPSHLGGSLSKQPMVDPLPHPGMGGPLSDLHAKTQGMYSGLAPGGNLSGLELGPMMG
GMKDTGGQQSRFKWMMEGHSPAPSPPDTTLHKNGPLPSAIKVRGGSPYSQYEMLGGDGLG
IPPQGPADSWHRTPGSKMGNKPATSSWPPEFQPGVPWKGIQSSGDPESDPYMTPGSVLGS
PGPPSLNDSDHQLLRDNIGPNPSLNTSLPSPGAWPYSASDSPLSNAHSTGKYSEYKPSWP
PEPIGQNKLWKTNRNSSQLPRPPPGLTNQKQASPSPWGSGGPRLARSWGGGGMNQESRFG
PGSAWSDGVASRGSCWLLLSNLTPQIDGSTLRTICMQHGPLLTFHLGLTQGSALIRYSSR
QEAAKAQGALHMCVLGNTTILAEFVSEEEVARYFAHSQAGGAEGASSGGAAAGGTQGSSG
TGPVVASSGGSSPGSERAAAGTTSGGNGNGGGGGESGAAVLSSVRSSGSGWQSLDGTGSS
SETSSAQGPGLGIFSQWSTNGSGEGGGVGGVEAGRSGLWGGMTAGYPSSSLWGAPQMEER
HQMDSPAALLPGDLLGGGADSI
NT seq
6189 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaagaaaaagaagaaagaagataaaaagaaaagggaaacctctcagaaggtg
ccagaacagaaaatcaaagtgccagaatcagccaagccctcctgctcccagccactcgcc
accccaggctcagtgtcccccagccctggccctgttgccccctcatcccccagtcctggt
gcagctggggtttctgcacaagttcctcctggtggtgggaacaatgcaaagcagcggact
gctgtggccaacggacagccctcctcctctccctctggaagccagagctcccagcagcag
cgatacatgtccagagaggttccaccgagatttcgctgccagcaggaccataaagtgtta
ctgaagaggggccagccaccgctgtcctccatgctgctggggggaggaggaggaggagga
ggaggaggggaagggggcacaggaggaggcagtggctgggtagccaccccacctgtttcc
tcacagggagcagataaccccaatgcaagcacagctggaggagcagattccaacctgggt
tcatcgtccccttcaccccccaactcctcgtcatcctcattatgtgtcgctgctctgtcg
tcttcttctactactactacttcaacttatgcaaattccacatggggggcaggctctggc
agccagtcctcttctcagggctgcgggaaggtgattgtggatgggactgacctggaggat
tggccaagcatcctaggcggggccaaattgagttctgacggggctggaggaggggtgcag
gagcaagactgccccagtaacaacaacaacagtagtgcctcatggagtgagagaaacatc
cagcagaagggaggagcagtaggaggaggagcagggaacatggacaatccttccccacct
cgttcttctcctcttccctcctcttcctcgcttaatgaatgtgttcagtcaagtggtggt
gtgtggggctcttccacctcctctcaggtggaggcagggctaggatcagcagcattttac
aattccaaagtctcccatcttcttcctgggcctcaggagagccctgtgggtggcagcagc
aatgtccctggtgccaatttcaaccccaacgtgaacccctctgcctggcctgccctggtg
cagggtgggacgtcaacttcggctagcgacggccttccacaacactcatccattacttca
gcttcctcgttctctgccagcaccaccctcatcaccactcactctctttcatctgtgaat
caaaccggtcttcatcagcagcatactgagacagctgtgggggccaggagtggagaaccg
cagcagcacttaggaaacccaggggcggagctgggttcaggtgggggagcacggggagca
ggaccaaatcaagaaggtggggatgagagggactgtggggtggctagtgttgaagaagaa
gggaatggtaacctttctggctcttcctcattagctgcctcttcttcttggagatccatg
cctccagtgtcctctgacatcagtgcaggtgcatcaaaggcagatgggtggggtggagga
gggactggagctcaggggcaggaagggaatgtgtggggctttggtagccagggtgaaaag
gcagggtggggcaggggaaatgatggtggctcaaataccccagtggtatctcagggagcg
tgggaaggaggcagttcagatgcagagtggggtggcacagcgggaggtgtaagttcgagt
aacttagcaataggaagtggaagaggaggagatgggagtagcagcaacagcagcagcagt
ggaggcagcgggggtattgggggcagtgttttgcaggactctgcctcaccaaagttggaa
actatgacaaaagcttgggacaatcagaaagggatggaaagtggggatggggtggttggg
gagtggggtggaggaggaggagtgcagggtggaggcactggaggtggaggaccatcatct
tctagtggaggaggctccacagctggaagtggtggagaagggagcggtagcagtcagaag
caggaccgagcctcagctgtgcgccaacgctccctccagacctccaatgctgaagtggcc
ttacttagcatgctcaatcgatctgacctggaccccagggttctgtctaacatgggctgg
gggcagacccagattcgacagaatgtggcctgggacctggacaccacaaaaggagtagga
aacagaaatgaaagaagcacttcatcttcctctgcattctcatcagcaaccatgaacact
accactagtcgtggtcctgggtacccgtctaacacaagttcagtaactaatgatccatct
tctggcagtcacacgaccagtctaaactctggccctgctacagtgaaggaaggctgggat
ggtggtgcaacacagaccacttgtggtcctcacatgcctggtagcactataaggaagcca
gggatgccagaagaagatagggagggcaacccaggaaaggcagctggtggctggggtgag
cacccacctgaaaaccagggcaaaggatgggggactgaagaacaacaatggagggaacac
agaggaggaggagggaacaggagagacattggagaacagggtagtggttgggcagatggt
ccagaggataaagggactggggggtggaaggggactggaagaggggaggcaggtgggtgg
ggaggagattggggaaagagagactctacacctggaagtgggtggggaagcgatggacga
aacagaggtggaaacaactctgatgagggatcttcctggggcaatttggatgaaggggga
tctcaacgaggaggatggggagggggagatgtgggtggaggcaaatcccaccaggactgg
gggagtgccaaaccccacacagcatcagcacagataccaaacagccaagtggcaccaatg
aaagccccaaatcaacagcagcaccaatcacagggccagcagccaccaggaggtcccatg
caaggagggtggaacagccggtccactgttggaggtggaggtggaggtggaggtggaggt
ccaccatccaagaatcagaaccaaagttcgggctggacttctggcccgatcccccaaatc
tctggaggtgggggggaaaccctggagcccagtggctgggaagaaccctcccctcagtcc
atcagtcgcaaaatggaaatcgacgatggcacttcagcctggggagacccaacccgctac
aacagtaagaatgtgaacttgtgggacaagaacagtgctacgcccagccaaagccacagt
caaccgcccccaccaccaccatccatgcagcagcaaccacctagaaggcagcaggcgatg
cagcatagcagggacacaaaccctggcaatgctacagtgggtatgtggggaggaggtgca
caatctgtggataatggtacagctgcgtggggccagacgtcagatgcagcaacaggttgg
ggggatccagatgaacccagcaaagcttccggctggggtaacccttcacccaaccctggc
aaacctagcaccaagtcaatggaaagctggggtgggaaaggagaaggctccgtggcagcc
tcccgtcaccccagctgggatgaggaagatgacggcggtggaggggtctggaacagcact
ggctcccagggaagcagctcctccttcaactcaggaggttggggtcagactcatggagga
aagagaggcaacatcaagagtggaggcggggacagttggatgaacccagtgtcacggcag
ttttcaaacatgggtcttctgggggatgacccaaatgatgacaaaaagatggaagtcgat
aagagaggtataactgactataatggagagatgcgaaggggaggaagaggtggaggaggt
taccgtatgcctagttccaaagacatgggtcctgtcgacatggggccgtatggtgaaaag
atgggtggccacggagtgtttgttggaagtggcggagggatgcctccgcctcgagggatg
caccaacctggcatgcatccgatgaacccctcccaggggttacgtgctcaagtgcctcat
cagttcctgtctgctcaggtgccgggtcctatgctgaagcagatgccctctcctggcggc
agcgtgggtggagtggttggaggagtgggaggtgtcggcagcgtaggaagtgtcggaggg
gtcggaggggtcggtggtgtcggaggaggagtgttccctcctcagatttccccacagcag
ctagcaatgcttagcaacatttacccccacatgcagcagtttcatctggcctgtcagctc
ctgatacaacagcagcaacagcagcagcagctcttgcagaaccagaggaagttccctcag
cctcagcctctcaggcagcagccagacccgcagcagcttgcaaggattatggctattctg
cagcagcagagacagcatcagcaaggtggagttggaggagctgcagcaggaggagggagc
tccaaactgtccccctctcacctgggaggaagcctatccaaacagcccatggtagaccct
cttccacatcctggaatggggggtcccttatcagaccttcatgccaaaacacaagggatg
tactctgggcttgcccccggtggtaacctgtcaggactcgagctcggtcccatgatggga
ggaatgaaagacacgggaggacagcagtcccgcttcaaatggatgatggagggacactcc
ccagctccctctccccctgacacaacccttcacaagaatggccctttacccagtgctata
aaggtgagaggaggatccccttactcccagtatgaaatgctgggcggtgatggtttaggg
attcccccacagggccctgcagacagctggcaccgaacccctggcagtaaaatgggcaac
aaacctgccacatcaagctggcctccagagttccagcccggtgtgccctggaagggaatc
cagagtagtggggaccccgagtctgacccctacatgacccccggtagtgttctcggctcc
ccaggacccccgagcctcaatgactctgaccaccagttactgcgagacaacatagggcca
aacccctccctcaacacctcgctgccttcacctggtgcctggccctacagtgcctcagac
agccccctcagcaatgcacacagcacaggaaagtactcggagtacaagcccagctggccc
ccagagcccatcggacaaaacaagttatggaagaccaatcgcaacagctcgcagctgcca
cgcccccctcctggcttaactaatcagaagcaggcctcgccctccccatggggcagtgga
ggcccacggttggcccggagctggggaggaggtgggatgaatcaagagtcgagatttggg
ccaggctcagcttggagcgatggtgtggcctccagaggcagctgctggctgctgctgagc
aacctgacccctcagatcgatggctccacactgaggactatctgcatgcagcatggcccc
ctgctgaccttccacctcggcctgacccagggcagtgctctgattcgctacagcagccgg
caggaagcagccaaggcccagggtgcactgcacatgtgtgttctgggcaacaccacaatc
ctggcggagttcgtgagtgaggaagaagtcgctcgctattttgcacattcccaggccgga
ggggcagagggagccagctcaggaggggccgcggccggtgggacgcagggctcatctgga
acaggccccgttgtggccagcagtggaggtagctccccagggagtgagcgggcggcagcg
ggcacaacttcaggtggaaatggaaatggtggtggaggaggggaaagtggagcagcggtt
ctcagtagtgtgcggtcctccggctctggttggcaaagtctcgatggtacaggcagttct
tcagaaacctcttcagcccaaggacctgggctggggatattttcccagtggagcaccaat
gggtctggggagggaggaggtgtcgggggagtagaggctgggaggtctgggctctggggg
ggcatgactgctggataccccagcagcagcctgtggggggcaccgcaaatggaggaaagg
caccaaatggacagccctgccgctttgttacctggcgacctgctgggaggaggagctgat
tccatctga
DBGET
integrated database retrieval system
