Seriola lalandi dorsalis (Yellowtail amberjack): 111673781
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Entry
111673781 CDS
T06058
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111673781
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
slal03041
]
111673781
03009 Ribosome biogenesis [BR:
slal03009
]
111673781
Enzymes [BR:
slal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111673781
Spliceosome [BR:
slal03041
]
Complex A
U1 snRNP components
U1 related factors
111673781
Complex B
111673781
Ribosome biogenesis [BR:
slal03009
]
Eukaryotic type
Pre-60S particles
Helicases
111673781
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
111673781
NCBI-ProteinID:
XP_023287414
Ensembl:
ENSSLDG00000024131
UniProt:
A0A3B4YSW9
LinkDB
All DBs
Position
Unknown
AA seq
618 aa
AA seq
DB search
MPGYSDRDRGRDRDRDRGYGGGPPRFGGNRGGGGGKFGNPGDRLRKKHWNLDELPKFEKN
FYQQHPDVTRRPPQEVEQYRRAKTITVKGRECPNPIAKFHEASFPSYVMDVINKMNWTEP
TPIQAQGWPLALSGKDMVGIAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTR
ELAQQVQQVAAEYGRASRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKT
NLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEY
VQINVGALQLSANHNILQIVDVCNDGEKENKLIRLLEEIMSEKENKTIIFVETKRRCDDL
TRRMRRDGWPAMGIHGDKSQQERDWVLNEFKYGKAPILIATDVASRGLDVEDVKFVINFD
YPNNSEDYIHRIGRTARSQKTGTAYTFFTPNNMRQASDLISVLREANQAINPKLLQMAED
RGGRSRGGRGGDYRDDRRDRYSGRRDFGSFRDRDNGRGFDNGPNKAFGTNTQNGGYGGNT
SSNGFGGGNYNGNGQSNFGNSQPGAFGGQNNFQAQQFAPKPGAQNGAGHPPFPFPQAQAP
QQHPAPLVPYPMPPQFSQ
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgcctggatattccgacagagaccgcggcagggacagagatagagatagaggctatggc
ggtggtcctcctcgctttggtggcaaccgtggtggcggtggaggaaagttcggcaaccct
ggtgatcggctgcggaaaaaacactggaacctggacgagctcccaaagtttgagaaaaac
ttctatcagcagcatcccgacgttacccggaggccaccgcaagaagttgaacaataccgg
agggccaaaacaattacagtgaaggggcgagagtgcccaaatcccattgccaagttccac
gaggccagctttccatcttatgtgatggatgtgatcaacaaaatgaactggactgaacca
acacccatccaagctcagggatggcctctggctcttagtggcaaagatatggtcggcatt
gcacagactggctctggcaaaacgctgtcttacctgttgcctgccatcgtgcacatcaac
caccagcctttcctggaacgtggagacggtccaatttgcttggtgctggccccaacccgt
gagctggctcagcaggtgcaacaggtggctgcagaatatggcagagcttctcgcctcaag
tccacctgtatctatggtggagcacccaaaggaccgcagatccgtgacttggaaagaggt
gtggagatctgcatcgccaccccaggaaggctcatcgacttccttgaagcaggaaagacg
aaccttcgacgttgcacttaccttgtactggacgaggctgacagaatgctggacatgggt
ttcgagccacagatccggaaaattgtcgaccaaatcagacctgaccgtcagaccctgatg
tggagtgccacttggccaaaagaggtccgccagctggcagaggacttcctgaaggagtat
gtccagatcaatgttggagcactgcagctcagtgcaaatcacaacatcctgcagatcgtg
gatgtctgcaatgatggagagaaggagaacaaactcatccgtctgcttgaggaaatcatg
agtgagaaggagaacaagaccatcatctttgtagagacaaagaggcggtgtgatgacctc
acgaggaggatgagaagggatgggtggccggctatgggaatccatggagataaaagccag
caggaaagagactgggttctcaatgagttcaaatatggaaaggctccaattctcattgcc
acagatgttgcctccagaggtctagatgttgaagacgtgaaatttgtcatcaactttgac
taccccaacaactcagaggactatatccaccgcattggccgaacagctcgtagccaaaag
acaggcacagcttataccttcttcactccaaacaacatgaggcaggccagcgacctcatc
tctgtgcttcgtgaggccaaccaggcaatcaaccccaagctcctccagatggcagaagac
agaggaggtcgttcaaggggaggcagaggtggtgattacagagatgaccgccgggatagg
tattctggaaggcgggattttggcagttttagggacagggataacggtagagggtttgac
aacggaccaaacaaagcctttggcacaaacacacagaatggaggctatgggggcaatacc
agcagcaacggcttcggtggaggcaactacaacggtaatggacagtccaactttggtaac
agccaaccgggagcctttggaggccagaacaacttccaggcccagcagtttgctcccaag
cctggcgcacagaacggcgctggtcacccccctttccccttcccccaggcacaggctcca
cagcagcatcctgctccgctggtgccctaccccatgcctcctcagttctctcagtaa
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