Sphingomonas lacunae: GV829_03405
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Entry
GV829_03405 CDS
T07071
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
slan
Sphingomonas lacunae
Brite
KEGG Orthology (KO) [BR:
slan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slan03009
]
GV829_03405 (rimO)
Enzymes [BR:
slan01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
GV829_03405 (rimO)
Ribosome biogenesis [BR:
slan03009
]
Prokaryotic type
ribosomal protein modification factors
GV829_03405 (rimO)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
QJQ31606
UniProt:
A0A6M4ASD0
LinkDB
All DBs
Position
740632..742026
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AA seq
464 aa
AA seq
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MTDITTLPEARKVGMVSLGCPKALVDSERILTRLRADGYAMSADYAGADVVLVNTCGFLD
SAKEESLEAIGEAIAENGRVIVTGCMGNEADAIRARFPEVLAITGAHQYEDVVSAVHQAA
PPSQGPYLDLIPQAQYDDAGLKLTPRHYSYLKISEGCNHACAFCIIPSLRGKLASRRIDA
VLREAEKLVAAGTQELLVISQDTSAYGVDVRHETRQWKGRDVRTHMTDLARELGQLRTAS
GHAPWVRLHYVYPYPHVSEVIPLMAEGLVTPYLDIPFQHAAPSVLKSMKRPANEAKVLER
LREWRAICPDIAIRSSFVVGFPGETEADFQYLLDWLDEAQLDRVGAFRFEPVAGAAANAL
PDPVPEEVKEERFQRIMAKTAAISAAKLAAKVGRTLPVIIDEVGEPDEEDGSVGATGRSQ
ADAPEIDGHVYLRDVPADLAPGTIVAVTVEDADEHDLYGVIHPA
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgactgacatcaccaccctccccgaagcccgcaaggtcggcatggtcagcctcggctgc
cccaaggcgctcgttgacagcgaacgcatcctcacccggctgcgcgccgatggctatgcg
atgagcgccgattatgccggggccgatgtcgtcctcgtcaacacctgcggcttccttgac
agcgccaaggaggagagccttgaggcgatcggtgaggcgattgccgaaaatggccgggtc
atcgtcaccggctgcatgggcaatgaggcggatgccatccgcgcccgcttccccgaggtc
ctcgccatcaccggcgcgcaccagtacgaagacgtggtcagcgccgttcatcaggccgcg
ccgccctcacaagggccctacctcgatctcatcccgcaggcgcaatatgatgacgccggg
ctgaaactcaccccgcgccactacagctatctcaagatcagcgagggctgcaaccacgcc
tgcgccttttgcatcatcccctccctgcgcggcaaactcgccagccgccgcatcgacgcc
gtcctgcgcgaagcggaaaagcttgtcgccgctggcacacaggaactgctcgtcatcagt
caggacacatcggcctatggcgtcgatgtccggcatgagacgcgccagtggaagggccgc
gacgtccgcacccacatgaccgatcttgcccgtgagctgggtcagttgcgcaccgccagc
ggccacgcgccgtgggtccgcctccactatgtctatccctatccgcacgtcagcgaagtc
atcccgctgatggccgaggggctggtcaccccctatctcgacatccccttccagcacgcc
gccccgtcggtcctcaaatcgatgaagcgtccggccaatgaggccaaggtgcttgagcgg
ctgcgcgaatggcgcgccatctgccctgatatcgccatccgctcctccttcgtcgtcggc
ttccccggcgaaaccgaagcggatttccagtatctgctcgactggctcgacgaggcgcaa
ctcgaccgggtcggcgccttccgtttcgagcctgtcgccggtgccgccgccaacgccctg
cccgacccggtgcccgaagaggtcaaggaagagcgtttccagcgcatcatggccaagacc
gcggcgatcagcgcggccaaactcgccgccaaggtcggccgcaccctgcccgtcatcatc
gacgaggtgggcgagcctgacgaggaggatggcagcgtcggcgccaccggccgctcacag
gccgacgccccggaaatcgacggccatgtctatctgcgcgacgtgcccgctgatctcgcg
cccggcaccatcgttgccgtcaccgtggaggatgccgacgagcatgacctctatggcgtc
atccacccggcctga
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