Sphingomonas lacunae: GV829_05825
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Entry
GV829_05825 CDS
T07071
Name
(GenBank) DUF853 family protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
slan
Sphingomonas lacunae
Brite
KEGG Orthology (KO) [BR:
slan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slan03400
]
GV829_05825
DNA repair and recombination proteins [BR:
slan03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
GV829_05825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_10
FtsK_SpoIIIE
ResIII
TrwB_AAD_bind
AAA_22
SLFN-g3_helicase
AAA_30
AAA_19
AAA
DEAD
Hydrolase
TraG-D_C
AAA_7
CbiA
AAA_16
AAA_6
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QJQ32033
UniProt:
A0A6M4ASJ1
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All DBs
Position
complement(1219534..1221153)
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AA seq
539 aa
AA seq
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MTDTGTMNNDIFIGQGGGQRQVINLRRANRHGLIAGATGTGKTVTLQGLAESFSAIGVPV
FVSDVKGDLSGMALAGTPTGKLHEIFAARAAEIGQSDWAYRDNPVTFWDLFGEQGHPVRT
TISEMGPLLLARLLGLNETQEGVLSIAFRIADEQQMLLLDLGDLQAMLAWCAENAGDLAT
RYGNVTKASVGAIQRQLLTLEDQGGDKFFGEPALDIMDMIQCDDQGRGVINILAADKLMA
SPKLYATFLLWLMAELFETLPEVGDPDKPKLVFFFDEAHLLFDEAPSALLDKVEQVVRLI
RSKGVGVYFVTQNPIDIPDSVAGQLGNRMQHALRAFTPREQKAIKAAAETFRANPNVDVE
EVITQLKVGEALVSTLMADGAPSPVERTLIKAPASRVGPLDERERAIIRSTSLVGDKYDH
VIDRESAEELLAAKAQAAVAAAEEAEAAEEQAKLDAARAKEEAKLAAQRERERLRTEAAE
ARERERAERAAAREAAKPSMTEKIVQSAARSAASSIGRQVAGSLGRSLVRGILGSLLGK
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatacagggactatgaacaacgacatcttcatcggccaaggaggcgggcaacga
caggtcatcaacctgcggcgggcgaatcggcatggactgatcgccggtgcgaccggaacc
ggcaagacggtgacgttacagggtctggcagagagtttctcggccatcggcgtcccggtc
ttcgtttccgacgtgaagggcgacctgtccggcatggcgctcgcgggaacaccgacaggc
aagttgcacgagatttttgcggcgcgggctgccgagattggccaaagcgactgggcctat
cgtgacaatcccgtcaccttttgggacttgttcggcgagcagggtcatcccgtgcggacc
accatttccgaaatggggcccttgcttctcgcccggttgctcggccttaacgagacgcag
gaaggcgttctgtcgatcgcctttcgcatcgcagacgaacaacagatgctgttgctcgat
ctgggcgatttgcaggcgatgctggcctggtgcgccgagaatgcaggggacctcgccacc
cgctatggcaatgtcaccaaggccagcgttggcgcaatccagcggcaattgctgacattg
gaagatcagggcggcgacaagttctttggcgaacccgcgctcgacatcatggacatgatc
cagtgcgacgatcagggacgcggggtcatcaacatcctcgccgctgacaagttgatggcc
agtcccaaactttatgcgacattcctgctgtggctcatggcggaattgttcgaaaccctc
cccgaagtgggtgacccggacaagccaaagctggtgttcttctttgacgaagcccatctg
ttgtttgatgaggccccttcggcccttcttgacaaggtggagcaggttgtccggctgatc
cgatccaagggggtaggtgtctatttcgttacgcagaacccgattgatattcccgacagc
gttgccgggcagttgggcaaccgcatgcaacacgccctgcgggcctttacaccgcgtgag
caaaaggcgatcaaggcggccgccgagacgttccgcgccaatcccaacgtcgatgtcgaa
gaggtgattacccagctcaaggtgggtgaggccctggtgtcgacactgatggccgatggc
gccccgtcgccagtggaacgcacgctgatcaaggcgcccgcgagccgtgtggggccgctc
gacgaacgtgagagggcgatcatccggtcaaccagcctggtgggtgacaaatatgaccat
gtcatcgaccgcgaatccgccgaagagttgctggcggccaaggctcaggccgctgtcgct
gctgcagaggaagccgaagccgctgaggagcaggccaaactggatgccgccagagccaag
gaggaggccaagctggccgcccagcgcgagcgcgagcggctcaggaccgaggcggcagaa
gcccgcgagcgggagcgggcagaaagggctgccgcccgtgaggctgccaagccctcaatg
actgaaaagatagtccaatcggcggcgcgatctgccgccagctcaatcggacggcaggtg
gcaggcagcctcggccgatcgctggtgcgcggcatattgggcagcctgttgggcaaatga
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