Sphingomonas lacunae: GV829_07960
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Entry
GV829_07960 CDS
T07071
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
slan
Sphingomonas lacunae
Brite
KEGG Orthology (KO) [BR:
slan00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slan02000
]
GV829_07960
Transporters [BR:
slan02000
]
Other transporters
Pores ion channels [TC:
1
]
GV829_07960
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
OMP_b-brl
Surface_Ag_2
OmpA_membrane
Opacity
Motif
Other DBs
NCBI-ProteinID:
QJQ32393
UniProt:
A0A6M4ATH2
LinkDB
All DBs
Position
1664398..1665513
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AA seq
371 aa
AA seq
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MRKLAVAMALASTALASPALARDDAWYVGVEGGVMIVEDVALDIGATENAGQINHDIGYD
FGGVVGYDFGGFRAEVEVSYRSADADSIEVGAPGIPGPRAAFFTGLSPNDGEASALSFMV
NGLFDMGDDDGLQGFVGGGVGVARTKIMNLYANPAWLNDSDTGFAWQALAGVRTPLTNNI
DVGVTYRYFNADGVDLVDSRGRDINTRLRTHSLLGTLTYNFGEPAAPPPPPPPPPPPPPP
PPPPPPPPPPPPAPVCNAGPYIVFFDWDRDNITAEAAQTLDNAVSAYANCGNTQVMVAGH
ADRSGAATYNVGLSNRRATNVGNYLAARGVPASAISTRAFGETQNRVPTPDGVRNDQNRR
VEINYGPGAGR
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagcttgccgtagctatggcactcgcttctaccgccttggcttcgcccgcgctg
gcgcgcgacgatgcctggtacgtgggagttgaaggcggcgttatgattgtcgaagacgtt
gctctcgacatcggcgccaccgaaaatgcaggtcagatcaaccacgacatcggttatgat
tttggcggcgtcgttggctatgattttggcggtttccgcgctgaagtcgaagtcagctac
cgctcggccgatgccgattcgatcgaagtcggcgcacctggcattccgggacctcgcgct
gccttcttcaccggtctttcgccgaacgacggtgaagcatcggctctgagcttcatggtc
aacggcctgtttgacatgggcgatgacgatggcctgcagggctttgtcggtggtggcgtc
ggcgtggcccgcaccaagatcatgaatctctatgccaaccccgcctggttgaacgattcg
gataccgggttcgcctggcaggctctggccggtgttcgcacgccgttgaccaacaacatc
gacgttggcgtcacctatcgctatttcaatgctgacggcgttgatctggttgatagccgt
ggccgcgacatcaacacgcgtctgcgcacccactcgctgctcggcacgctgacctacaac
ttcggcgaaccggctgcaccgccgcctccgccgccgccgccgcccccgcctcccccgcct
ccgcctccgcctccgcctccgcctccgccgcctccggcgccggtgtgcaacgcgggtccg
tacattgtcttcttcgactgggatcgggacaatatcacggctgaagcggctcagacgctg
gacaacgctgtatcggcttatgccaactgcggtaacacgcaggtcatggttgccggtcac
gctgaccgttcgggtgctgccacctacaacgtcggcctgtcgaaccgtcgcgccaccaac
gtcggcaactatcttgctgctcgtggcgtcccggcttcggcaatttcgacccgcgccttc
ggtgaaacgcagaaccgcgttccgaccccggacggcgttcgcaacgaccagaatcgtcgc
gtcgaaatcaactatggtcctggcgctggccgctga
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