KEGG   Sphingomonas lacunae: GV829_08050
Entry
GV829_08050       CDS       T07071                                 
Name
(GenBank) RNA pseudouridine synthase
  KO
K06177  tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
Organism
slan  Sphingomonas lacunae
Brite
KEGG Orthology (KO) [BR:slan00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:slan03009]
    GV829_08050
   03016 Transfer RNA biogenesis [BR:slan03016]
    GV829_08050
Enzymes [BR:slan01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     GV829_08050
    5.4.99.29  23S rRNA pseudouridine746 synthase
     GV829_08050
Ribosome biogenesis [BR:slan03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    GV829_08050
Transfer RNA biogenesis [BR:slan03016]
 Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    GV829_08050
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: QJQ32409
UniProt: A0A6M4AWJ3
LinkDB
Position
complement(1679359..1680033)
AA seq 224 aa
MLADHVLHIDSEALIVDKPAGLPVDAPRDGSLSVENHLQSLMLGYREWPRPVHRLDRDTS
GCLMLGRSAKAHKRLSLAFEQGLVAKRYLAILDGVPEGEGGLIDMPLTKVSTKEDGWRIV
AAAGDSKGAKSARTRWEVMSIAAGRALIAFHPETGRTHQLRVHAASGLGHAIVGDPIYGT
THEAGLMLHAADLSLAREGKTLINAHAPFPARFAALGFADPDAD
NT seq 675 nt   +upstreamnt  +downstreamnt
atgcttgcggatcatgtcctccatatcgacagcgaggcgctgatcgtcgacaaaccggcc
ggcctgccggtcgatgcgccacgcgacggcagcctgtcggtcgaaaaccatctccagtcg
ctgatgcttggctatcgcgaatggccccgcccggtgcacaggctcgaccgcgacacttcg
ggttgcctgatgctgggccgcagcgccaaagcgcacaagcgcctcagtctcgcctttgaa
caggggctggtggcgaaacgctatctcgccattctcgacggcgtgccggagggcgaaggc
gggctgatcgacatgccgctgaccaaggtttcgaccaaggaagacggctggcgcatcgtt
gctgccgcaggggacagcaagggcgccaaatccgcacggaccaggtgggaagtgatgagc
atcgccgctggccgtgcgctgatcgcctttcaccccgaaaccggccgaacgcaccagctg
cgggtgcatgccgcatcggggctgggccatgctatcgttggcgaccccatctatggcacc
acgcatgaagccgggctcatgctgcatgccgccgacctcagcctggcgcgcgagggcaag
acgctgatcaatgcccacgcccccttccctgcccgctttgccgcgctgggttttgccgat
ccggatgcggattga

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