Sphingomonas lacunae: GV829_08315
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Entry
GV829_08315 CDS
T07071
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
slan
Sphingomonas lacunae
Brite
KEGG Orthology (KO) [BR:
slan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slan03032
]
GV829_08315
03036 Chromosome and associated proteins [BR:
slan03036
]
GV829_08315
03400 DNA repair and recombination proteins [BR:
slan03400
]
GV829_08315
DNA replication proteins [BR:
slan03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
GV829_08315
Chromosome and associated proteins [BR:
slan03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
GV829_08315
DNA repair and recombination proteins [BR:
slan03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
GV829_08315
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
QJQ32451
UniProt:
A0A6M4AZI6
LinkDB
All DBs
Position
complement(1729487..1729768)
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AA seq
93 aa
AA seq
DB search
MIRSELVQRLAAENPGLRPAEIEAVTDSFFETIIDHLAQGGRVELRGFGTFSTRSRDARE
GRNPRTGEIVSIPAKNVPYFKAGKEIRSRLNSD
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgatccggtctgaactggtacaacgactggccgcagaaaatcccggccttcgtcctgcc
gagattgaagcggtgaccgactctttctttgaaaccatcatcgatcatctagcacagggc
ggccgggtggaactgcgcggtttcggcactttctcgacgcgcagccgcgatgcgcgcgaa
ggccgcaaccccaggactggtgagattgtctccatcccggccaaaaatgtgccctatttc
aaggcgggcaaggagatccgttctcgcctgaacagcgactga
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