Sphingomonas lacunae: GV829_08860
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Entry
GV829_08860 CDS
T07071
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
slan
Sphingomonas lacunae
Brite
KEGG Orthology (KO) [BR:
slan00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slan02000
]
GV829_08860
Transporters [BR:
slan02000
]
Other transporters
Pores ion channels [TC:
1
]
GV829_08860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Y4YQ_C
Motif
Other DBs
NCBI-ProteinID:
QJQ33674
UniProt:
A0A6M4AX48
LinkDB
All DBs
Position
complement(1828294..1830549)
Genome browser
AA seq
751 aa
AA seq
DB search
MIALAVALSSTTAFAEESASSADAAADASTILVVGQKDAPITVVPRGLSVSLGQEEFDAV
NALNVEDLMKYAPNFFVRKRFAGDDNAVVALRGANTIQSARTIVMVDGFVVSNFLGNRWD
FPPKWNVVGPAEVRQFDIVYGPYSARYGGNSMGGVISVTTQEPKETGAYATAQTMIMPFK
EYGFDETFKGYSLEGGVNWKQKDGPWSVRISGRHFENTGQSMTYNLLTATTGTGTAVTGA
YEDPRLATPVFGAASPVDVTQDQARLRIGYATADGWQIDALGMVWLTRQDLTDPRSWLVN
ASTVAPVYQGKVSFGGRVWNATGLTMSKTRRTEYLAGLKLAGPAAGWDVSLNLSRYWIPK
WDTRTSKDYATGVALGQGTQSLVNAPGWYTGDLTIERAFGQHKIALGANANLYQTSTDSF
TTTNWDAATAPTYSTSTYGKTSLWGVWLEDAIDLGNSWVLTGGLRYDGWRAYDGGIAKVY
SGARKDDGYPTRTDNSFSPKLSLQGELSDALAVQISLGTSKRFPTVGELYQGRFDDISQA
IDPQSFDPNLKAERSEDANLILRYGTGKVQTTLSLFYQNIKDAIFSFSGLNQFGTVITSY
KNVDQVRQYGAELMVEAKDILIQGLDVDANLAWIDAKTVKNAANPAAEGVQFPRIPEWRA
NGNIRYRVAEPVKASIGWRYASRPNSDLFGIVRGDAYGFQTEYFTVDTRVTWQLSKQLEL
GAGIDNLFNDQAYVSHPLPQRTFVLDLKAKW
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgattgcactggcggtagcactgagttccacaactgcctttgcagaagaatccgcctcc
tcagccgatgcagccgcagacgcgtcaacaattctagtggtaggccagaaggacgctccc
atcaccgtggtcccacgcgggctttccgtctcgctggggcaggaggaattcgacgcagtc
aacgcgctcaatgtcgaagaccttatgaagtacgcgccgaacttcttcgttcgcaagcgg
tttgcgggcgatgataacgcggtggttgcactgcgcggcgccaatacgatccagagcgcg
cgcacgatcgtcatggtcgacggctttgtcgtatccaacttccttggcaaccggtgggat
tttccgcccaagtggaatgtcgtcggcccggccgaagtgcgccagttcgacattgtctat
ggtccctattctgcgcggtatggcggcaactcgatgggcggcgtgatctctgtgacgacc
caggagcctaaagaaactggggcctatgcgacggcgcaaaccatgatcatgccgtttaag
gaatatggctttgacgagaccttcaagggctacagcctggaaggcggcgtcaactggaag
cagaaagatggcccttggtcggtgcggatttctggccgccattttgaaaacaccggccag
tcgatgacctataacctgctgactgccacaaccggcaccggcacagccgtgaccggagcc
tatgaagacccacgtctcgccacgccggtgtttggtgccgcctcacccgttgacgtgacc
caagatcaggcccgactgcgcattggctacgcgactgcggacggttggcaaatcgacgcg
ctgggcatggtctggttgaccaggcaggatctgactgacccgcgaagctggctggtgaac
gccagtactgttgcgccggtctatcagggtaaggtcagcttcggcggcagagtctggaat
gcaaccggcctcaccatgtcgaagacccgccgaaccgaatatctggccggcctcaagctg
gcgggccctgctgccggctgggatgtgtctctaaacctctcgcgatattggatccccaag
tgggacacccgcacttcgaaggattatgccacaggcgttgcgctgggacagggcacgcag
tctctcgtcaacgcacccggctggtacaccggggatcttacgatcgagcgcgcatttggc
cagcacaagatcgccttgggtgcgaacgccaacctctaccagacctcgaccgatagcttc
acgacgacaaactgggacgctgcaactgccccaacctattcaacctcaacctatggcaag
accagcctctggggggtgtggcttgaagacgcgattgaccttggcaatagctgggtcctg
accggaggcctaaggtatgacggctggcgcgcttatgatggcggcattgcgaaagtctat
tcgggcgcccgcaaggacgatggttatcccacgcgaacggataacagcttcagtcccaag
ctgagcctgcaaggtgaactaagcgatgcactggcggtccagatcagccttggaacgtcc
aagcgctttccaacggttggcgaactctaccaaggtcgctttgatgacatatcgcaagcc
atcgatccgcaaagcttcgaccctaacctgaaggctgaacgctcggaggatgcaaacctc
atcctgcgttacggtaccgggaaggttcaaacgacgctcagcctgttctaccagaacatc
aaggatgccatcttcagcttcagcggcctcaatcagttcggcacggtcatcaccagctac
aagaatgtcgatcaggtccggcaatacggcgccgagctaatggttgaagccaaggacatc
ctgattcagggccttgatgttgacgctaacctggcctggatcgatgcaaagacggttaag
aacgctgccaatccagccgccgaaggggttcagttcccccgtatcccggaatggcgagcc
aacggcaacattcggtatcgcgtggctgagccggtcaaggcatcgatcgggtggcgctac
gcatcgcgtcccaactccgacctttttggaatagtccgcggggacgcatatggtttccag
accgagtacttcacagtcgacacccgcgtgacctggcagctcagcaagcagctcgaacta
ggcgctgggattgataacctgttcaacgatcaggcctatgtgtcgcatccgctaccgcag
cggacgttcgttcttgatctgaaagcgaagtggtaa
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