Sphingomonas lacunae: GV829_09885
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Entry
GV829_09885 CDS
T07071
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
slan
Sphingomonas lacunae
Brite
KEGG Orthology (KO) [BR:
slan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slan03032
]
GV829_09885
03036 Chromosome and associated proteins [BR:
slan03036
]
GV829_09885
03400 DNA repair and recombination proteins [BR:
slan03400
]
GV829_09885
DNA replication proteins [BR:
slan03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
GV829_09885
Chromosome and associated proteins [BR:
slan03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
GV829_09885
DNA repair and recombination proteins [BR:
slan03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
GV829_09885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
DUF2267
HU-CCDC81_euk_1
HU-CCDC81_euk_2
Rpf1_C
TraC
Motif
Other DBs
NCBI-ProteinID:
QJQ32714
UniProt:
A0A6M4AUJ9
LinkDB
All DBs
Position
2062535..2062807
Genome browser
AA seq
90 aa
AA seq
DB search
MNKQELVGAVAEKTGLAKNDAAKAVDAVFDAVTAELKKGGDVRLVGFGTFSVTKRKASTG
RNPRTGETMTIKASSQPKFKAGKGLKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagcaagaactggtaggagcggttgctgagaagacgggcctggcgaagaatgat
gctgccaaggccgttgacgcagttttcgatgccgtcaccgctgaactcaagaagggtggc
gacgtccgtcttgttggtttcggcactttctcggtcaccaagcgcaaggcttcgaccggc
cgcaacccgcgcaccggtgaaaccatgaccatcaaggcttcgagccagcccaagttcaag
gctggcaagggtctgaaggacgcggtcaactga
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integrated database retrieval system
