Sphingomonas lacunae: GV829_11955
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Entry
GV829_11955 CDS
T07071
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
slan
Sphingomonas lacunae
Pathway
slan03420
Nucleotide excision repair
slan03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
slan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GV829_11955
03430 Mismatch repair
GV829_11955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slan03400
]
GV829_11955
Enzymes [BR:
slan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GV829_11955
DNA repair and recombination proteins [BR:
slan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GV829_11955
MMR (mismatch excision repair)
Other MMR factors
GV829_11955
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
AAA_12
AAA_22
AAA_11
Glyco_transf_9
DEAD
AAA_25
Motif
Other DBs
NCBI-ProteinID:
QJQ33752
UniProt:
A0A6M4AZF9
LinkDB
All DBs
Position
complement(2492872..2495118)
Genome browser
AA seq
748 aa
AA seq
DB search
MPAYAAGLNPAQQEAVLTTEGPVLVLAGAGTGKTSALTARLAHIVQSGRAWPSQILAVTF
TNKAAREMRERIAKLVGPSSEGMAWLGTFHAMAAKMLRRHAELVGLHSNFTILDTDDQLR
VIKQLLQAEGIDDKRWPNRQFAALLDRWKNRGLTPADLQAGDDDGFAHGKGLALYQLYQD
RLRTLNACDFGDLLLHMLVIFRTHREVLADYQQRFRYILVDEYQDTNAAQYLWLRLLAQE
RKNIAVVGDDDQSIYSWRGAEVANILRFERDFPGAKVIRLEQNYRSTPHILGAASGLIAN
NGERLGKTLWTEAEAGEKVRVIGVWDGPEEARRVGEEIEQLQRIGVSPDTIAILVRASFQ
TREFEERFIHIGVPYKVIGGFRFYERAEIRDAIAYLRLINQPADDLAFERIVNTPKRGLG
DKAMASVHRIARDQRVPLLAAAAMIGQSDEGTPQARRSLAGFAQSVARWRDQASAVNHAT
LAQIVLDESGYTAMLQADKSSEAAGRLENLQELVRAMEEYETLDEFLEHVSLVMDNEAAS
DEPKVTIMTVHAAKGLEFGHVFLAGWEDGLFPSQRALDEGGLRSLEEERRLAYVAITRAR
ERCTILHAANRRVYGQWQSAIPSRFIAELPPEHVEQENTMGGGESLWRANWSTVSDPFAD
VGRGTGRGPGWQRASQTAYDPAPKRIVEARGSAVSLGNKGRSDLAIGMRIFHEKFGYGLI
QDIEGNKLEVEFETAGAKRVLDSFVTIA
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgccggcctatgccgctgggctgaatccggcgcagcaggaggctgtgctaacgaccgaa
gggccggtattggtattggctggcgccgggactgggaaaacctcggcgcttaccgcgcgt
ctggcccatattgtccaatcaggtcgggcttggccctcccagatactggctgtgaccttc
accaacaaggccgcgcgcgaaatgcgcgagcgcattgccaagcttgtcggcccatcgagt
gaagggatggcgtggcttggtacatttcacgccatggccgccaagatgctgcgtcgccac
gctgaactggtcggactgcacagcaatttcaccatcctcgataccgatgaccagttgcgc
gtcataaagcaattgcttcaggccgaagggatagacgacaagcgttggcccaaccggcaa
tttgcggcccttctcgaccggtggaagaatcgcggtttgaccccggctgatcttcaggcc
ggtgacgatgatggttttgcgcatggcaaggggctggcactttaccagctgtatcaggac
cggttgaggactctgaacgcttgcgattttggcgatctgttgctgcacatgctggtgata
ttccgcactcaccgtgaagtgctggcggattatcaacaacggttccgctacattttggtc
gatgagtatcaggacaccaatgccgctcaatatctgtggctgcggctgctggcgcaggag
cgcaagaatatcgcggttgtaggtgatgacgaccagtcgatctatagctggcgcggcgcg
gaagtcgccaatatcctcaggttcgagcgcgattttccgggtgccaaggtcatccggctt
gaacagaattaccgttcgaccccgcatattctgggcgccgcatccggcctgatcgccaac
aatggcgagcggctgggcaagacgctctggaccgaagccgaagccggcgaaaaggtcagg
gtcatcggtgtgtgggacggccccgaggaagcgcgccgggtcggcgaagagattgagcag
ctgcagcggatcggtgtctctcctgacaccattgccattctcgtgcgtgcttcgttccag
acgcgtgaattcgaagaacggttcatccacatcggcgtgccatacaaggtcattggcggc
ttccgtttctatgagcgcgcagaaataagagacgcaattgcctatctgcgactgatcaat
cagcctgcggatgatctggcgttcgaacggatcgtcaacacgcccaagcgcggtctgggc
gacaaggcgatggcgtcggtccaccgcatcgcccgagatcaacgcgtgccattactggcg
gctgcggcaatgattggccagagcgatgagggcacgccgcaggcgcgtcggtcgctggcg
gggtttgcgcagtccgtcgcccgctggcgcgatcaggccagtgcggtgaaccatgccacg
ttggcgcagatcgtcctggatgagagcggctacaccgccatgttgcaagcggacaagagc
agcgaggccgcaggacggctggaaaacctgcaggaacttgtccgggcgatggaggaatat
gagacgctcgacgaattccttgagcatgtcagcctggtcatggacaatgaggcggcaagt
gatgagcccaaggtgacgatcatgaccgtccatgccgccaaggggctcgagttcgggcat
gtcttcctcgcgggttgggaagatggcctgtttccatcgcagcgcgcccttgatgaaggt
ggcttgcgctcgctcgaagaggagcggcggctggcctatgtcgcgatcacccgtgcccgg
gaacgctgcaccatcctccacgccgccaatcgccgcgtttatgggcaatggcaaagcgca
atcccgtcgcggtttatagccgaattgcccccagagcatgtcgagcaggaaaacacgatg
ggcggcggtgaatcgctgtggcgggccaactggtcgacagtcagcgatccatttgccgat
gtcggccgcggaacggggcgcgggcccggttggcaaagggcgagccagacagcttatgat
cccgctcccaagcggattgtcgaggcgcgtggcagcgccgtctcgcttggcaacaagggt
cgcagcgatctcgccatcggcatgcgcatatttcacgaaaagttcggctatggccttatc
caggacattgaaggcaacaagctggaggttgagtttgagaccgctggcgcgaaacgcgtc
ctcgacagctttgtgaccatcgcctga
DBGET
integrated database retrieval system
