KEGG   Sphingomonas lacunae: GV829_12205
Entry
GV829_12205       CDS       T07071                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
slan  Sphingomonas lacunae
Pathway
slan00010  Glycolysis / Gluconeogenesis
slan00020  Citrate cycle (TCA cycle)
slan00260  Glycine, serine and threonine metabolism
slan00280  Valine, leucine and isoleucine degradation
slan00310  Lysine degradation
slan00380  Tryptophan metabolism
slan00620  Pyruvate metabolism
slan00630  Glyoxylate and dicarboxylate metabolism
slan00640  Propanoate metabolism
slan00670  One carbon pool by folate
slan00785  Lipoic acid metabolism
slan01100  Metabolic pathways
slan01110  Biosynthesis of secondary metabolites
slan01120  Microbial metabolism in diverse environments
slan01200  Carbon metabolism
slan01210  2-Oxocarboxylic acid metabolism
slan01240  Biosynthesis of cofactors
Module
slan_M00009  Citrate cycle (TCA cycle, Krebs cycle)
slan_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
slan_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
slan_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:slan00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    GV829_12205 (lpdA)
   00020 Citrate cycle (TCA cycle)
    GV829_12205 (lpdA)
   00620 Pyruvate metabolism
    GV829_12205 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    GV829_12205 (lpdA)
   00640 Propanoate metabolism
    GV829_12205 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    GV829_12205 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    GV829_12205 (lpdA)
   00310 Lysine degradation
    GV829_12205 (lpdA)
   00380 Tryptophan metabolism
    GV829_12205 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    GV829_12205 (lpdA)
   00670 One carbon pool by folate
    GV829_12205 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:slan04147]
    GV829_12205 (lpdA)
Enzymes [BR:slan01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     GV829_12205 (lpdA)
Exosome [BR:slan04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   GV829_12205 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 GIDA FAD_oxidored FAD_binding_3 HI0933_like NAD_binding_8 AlaDh_PNT_C 2-Hacid_dh_C Thi4 UDPG_MGDP_dh_N Lys_Orn_oxgnase 3HCDH_N PolC_DP2_cat
Other DBs
NCBI-ProteinID: QJQ33108
UniProt: A0A6M4AVG5
LinkDB
Position
2553001..2554395
AA seq 464 aa
MTTTYDLIVLGSGPGGYVAAIRAAQLGLKTAIVERESLGGICLNWGCIPTKALLRSAEIY
HYMRHAGDYGLIAQGISADIDAVVKRSRGVAKQLNQGVTHLMKKNKIAVHMGEGVLTAPG
KLTVTKDGKSEELSAKNIIIATGARARDLPFAPADGKRIWTYRHAMVPPEMPTKLLVIGS
GAIGIEFASFYNDMGADVIVVEMMDRIVPVEDAEVSDFLEKSLTKQGMTILTGAALESLS
SDDKGVTAAIKGKDGKVVSGQYSHCIVAIGIVPNTENIGLEALGVETNRGHIVTNALCQT
NVAGLWAIGDVTAPPWLAHKASHEGVIAAEAIAGGHPHAMDPRNIPGCTYCHPQIASVGL
TEAKAREAGYVVKVGKFPFIGNGKAIALGEAEGFIKTIFDEATGELLGAHMIGAEVTELI
QGYVVGKTLETTERELMDTVFPHPTLSEMMHESVLSAYGKALHF
NT seq 1395 nt   +upstreamnt  +downstreamnt
gtgaccaccacctacgacctcatcgttctcggctccggtcccggcggctatgtcgccgcc
atccgcgcggcacagttggggctgaaaaccgcgattgtcgagcgagagagtctgggcggc
atctgcctcaactggggctgcatcccgaccaaggcactgctgcgctcggccgaaatctat
cattatatgcggcatgccggtgattatggtctgatcgcgcaggggatcagcgcggacatc
gacgcggtggtcaagcgctcgcggggggtcgccaaacagctaaatcagggcgtcacccac
ctgatgaagaagaacaagatcgccgttcacatgggtgagggcgtcctgaccgctccggga
aagctgacggtgaccaaggacggcaaaagcgaagagctgtctgccaaaaacatcatcatc
gctaccggcgcccgcgcccgagatctgccctttgcgccggcggatggcaagcgcatctgg
acctatcgtcacgccatggtcccgcccgaaatgccaaccaagcttctggtcataggctcg
ggcgcaatcggtatcgaattcgccagtttctacaacgatatgggcgctgatgttatcgtc
gtcgaaatgatggaccgcatcgtgccggtagaggatgccgaagtttccgacttcctcgaa
aagtcgctgaccaagcagggcatgaccatattgaccggtgcagcgctcgaaagcctgtcg
agcgacgacaagggcgttaccgccgcgatcaagggcaaggatggcaaggtcgtcagcggc
cagtacagtcattgcatcgtcgccatcggcatcgtccccaacaccgagaatatcggtctg
gaggcgctcggcgtcgagaccaatcgcggccacatcgttaccaatgcgctgtgccagacc
aatgtcgccggcctgtgggccatcggtgatgtcaccgcgccgccttggctagcgcacaag
gcgagccatgagggtgtcatcgccgccgaagccattgccggtggtcatccgcatgcaatg
gatccgcgcaacatccccggctgcacctattgccacccgcagattgccagcgtcggcctg
accgaagccaaggcaagggaagcaggctatgtggtcaaggtcggcaaatttccgttcatc
ggcaacggcaaggccatcgcgctcggagaggccgagggtttcatcaagaccatattcgac
gaggcaactggtgaattgctgggtgcccacatgatcggcgccgaagtcacagagttgatc
cagggctatgtcgtcggcaagacgctggagacgacggaacgcgagttgatggacaccgtg
tttccccaccccacgctcagcgagatgatgcacgagagtgttctctcggcctatggcaag
gccctgcatttctga

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