KEGG   Solitalea lacus: L2B55_00105
Entry
L2B55_00105       CDS       T09884                                 
Name
(GenBank) integration host factor subunit beta
  KO
K03530  DNA-binding protein HU-beta
Organism
slas  Solitalea lacus
Brite
KEGG Orthology (KO) [BR:slas00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:slas03032]
    L2B55_00105
   03036 Chromosome and associated proteins [BR:slas03036]
    L2B55_00105
   03400 DNA repair and recombination proteins [BR:slas03400]
    L2B55_00105
DNA replication proteins [BR:slas03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    L2B55_00105
Chromosome and associated proteins [BR:slas03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    L2B55_00105
DNA repair and recombination proteins [BR:slas03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      L2B55_00105
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_euk_2 HU-CCDC81_euk_1 DUF2267
Other DBs
NCBI-ProteinID: UKJ07581
LinkDB
Position
37508..37837
AA seq 109 aa
MTKAEVIAEIAQKTGIEKVDVAECVEAFFKVIKNSMIEGENVYVRGFGSFVIKKRAEKTA
RNISKNTAIIIPEHFIPSFKPAKVFVEKVKNSSAKAKMAAAAAERVVEA
NT seq 330 nt   +upstreamnt  +downstreamnt
atgactaaagctgaggtaattgcagaaattgcacaaaaaactggaattgagaaagttgat
gtagcagagtgtgttgaagcatttttcaaagtaatcaaaaactcaatgattgaaggcgag
aatgtttatgtgagaggatttggaagctttgttatcaaaaaaagagctgaaaaaactgcc
agaaatatttctaaaaacactgcaatcattattcctgagcactttatcccaagctttaaa
ccggcaaaagtgtttgtagagaaagtaaaaaacagcagtgcgaaagctaaaatggctgca
gctgctgcagaaagagtagtagaagcgtaa

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