Solitalea lacus: L2B55_06565
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Entry
L2B55_06565 CDS
T09884
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
slas
Solitalea lacus
Pathway
slas03030
DNA replication
slas03430
Mismatch repair
slas03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
L2B55_06565 (dnaE)
03430 Mismatch repair
L2B55_06565 (dnaE)
03440 Homologous recombination
L2B55_06565 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slas03032
]
L2B55_06565 (dnaE)
03400 DNA repair and recombination proteins [BR:
slas03400
]
L2B55_06565 (dnaE)
Enzymes [BR:
slas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
L2B55_06565 (dnaE)
DNA replication proteins [BR:
slas03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
L2B55_06565 (dnaE)
DNA repair and recombination proteins [BR:
slas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
L2B55_06565 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
SHS2_Rpb7-N
T2SSK
RE_MjaI
DUF6282
Motif
Other DBs
NCBI-ProteinID:
UKJ08825
LinkDB
All DBs
Position
1551858..1555415
Genome browser
AA seq
1185 aa
AA seq
DB search
MPEFSHLHVHTQFSLLDGAADISKLFKKAANDGMRALAITDHGNMFGVFKFVAEAGKHDN
KVKPIVGCEFYVVADRHEKKFSKEKKDKRYHQLFLAKNANGYKNLTKLCSYGYMEGLYSK
WPRIDKELILKYHEDLIATTCCIGASVPQAILNEGEEAAEKEFKWWLDIFGEDYYIELQR
HNLPEQVKVNEVLLRFAKKYNVKVIASNDSHYVDQADANAHDILLCINTGDIQSTPIATD
EEGGKGYRFGFPNDQFFFKTQAEMNALFHDIPEAIDNTNEIVDKVDLLKLKQDILLPNFP
IPPGFVDQMQYLEHITWEGARARYGDDLTPDKEERINFELHTIRTMGFAGYFLIVSDFIK
AGRDMGVFIGPGRGSAAGSAVAYCIGITNIDPIKYNLLFERFLNPDRKSMPDIDTDFDDE
GRQRVIDYVVDKYGKTQVAQIITYGSMAAKMSIKDVARALDLPLPDSNAMAKLVPDKPGI
SLDRVMNAPIDGDKSLKDKEGLGPEDIENVKQLREIREGSDLRSKVIKEALILEGSIRGT
GIHAAGIIIAPEDLTNIVPVAVAKDSDLLVTQYEGKVIEDAGVIKMDFLGLKTLTIIRDA
LRMIKENHGVEFDIDYIPLDDQKTFELYQRGETNGTFQFESPGMQKYLKDLVPDKFEDLI
AMNALYRPGPIEYIPDFIERKHGRKAVEYDLADMEEYLFDTYGITVYQEQVMLLSQKLAN
FTKGDADVLRKAMGKKDRKTLDKLKPQFIDNAKEKGHDAKVLEKVWTDWEAFASYAFNKS
HSTCYAFVAYQTAYLKAHYPAEYMASVLTHTKGQIDKITFFMEECKRIGVPVLGPDVNES
ALHFTATKKGQIRFGLSGIKGLGEAAIESLVTERKENGPYESVYDFARRVNLRAVNKKSW
ENLVYSGAFDCYGEYHRAQYFGVNISDRLNGIERLVKYGNDFVANQNSAQNSLFGGTADA
HVPEPPLPDSEEWSLLQKLSFEKEVVGMYISGHPLDDYKLEIENFCNSQIIDLATPKPGT
LVVAGIITSAEERLTKHGKPFGGFTFEDYSGSHRMIMFSEDYLKNKHFFQSGLLVFVRGS
FKPRFGQADNLEFKVESIQLLSEIREKMAKNVTLSFPLHELTLEFIDNLEALCKANPGNC
KLKLNVIDALERIVLDLPSKSIKVDPNNNFMSEIGKFKNVNFSLN
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattcagtcacctgcacgtacatactcagttttccctgctcgatggagctgcg
gatatctccaagctttttaaaaaggcggccaatgacggcatgcgcgctcttgccattacc
gaccatggtaacatgttcggcgtgttcaagttcgttgccgaagccggtaagcatgataac
aaggtaaaaccgattgttggttgtgagttctatgtagtggccgatcgtcatgaaaagaag
ttttccaaagagaaaaaagataagcgctatcaccagttgttccttgccaaaaacgccaat
ggctataagaatcttaccaagctttgttcgtatggatacatggaggggttatacagtaag
tggcctcgtattgataaggaattgattttaaaatatcatgaagaccttattgctactacc
tgttgtattggggcttcggttccgcaggccattttaaatgagggcgaagaagcagcagaa
aaggaatttaaatggtggttggatattttcggtgaagattattatatcgaactgcagcgc
cataatctgcccgaacaagtaaaagtgaacgaagtgcttcttcgctttgctaaaaaatac
aatgtaaaggtgattgcatccaatgattcgcactatgtggatcaggcagatgccaatgcc
catgatattttgctgtgtattaacaccggtgatattcagtcgactccaattgcaacggat
gaggaaggtggtaaaggttatcgttttggtttccctaacgaccagttcttcttcaaaact
caggcagagatgaatgccttgtttcatgacattccggaagcaattgataataccaatgag
attgtcgataaggttgacctgctgaaactaaagcaagacattttgcttccgaacttccca
attccaccgggctttgtcgatcagatgcaatatctggagcatattacctgggaaggagca
agggcacggtatggagatgacctgacaccggataaggaagaacgtatcaattttgagctg
cataccattcgtacaatgggatttgccggttacttccttatcgtatccgatttcattaag
gccggacgcgatatgggcgtattcattggtccgggccgtggttcagctgcgggttcagcc
gtggcttattgtatcggtatcaccaatattgacccgattaaatacaatctcctgtttgag
cgtttcctgaatcccgatcgtaagtcaatgcccgatattgatacggacttcgacgacgag
ggccgtcagcgcgtgattgattatgtggttgataaatatggcaagacacaggtagcacaa
atcattacctacggctccatggccgccaagatgagtatcaaagacgtggctcgtgccttg
gatttacctttgcccgattcgaatgccatggccaaactcgtacctgataagcctggtatt
tctttggatagggtgatgaacgcccctatcgatggggataaatcactgaaagataaagag
ggacttggtcctgaagatatagagaacgtgaagcagcttcgcgaaattcgtgaaggatct
gatcttcgttctaaagtaattaaggaagccctgattttggagggttctatccgcggaaca
ggtatccacgcagcgggtatcatcattgccccagaagatttaacgaatatcgttcccgta
gcagtagccaaagattctgatctgttggttacgcagtacgagggaaaggtaattgaagat
gccggcgtaatcaagatggactttttgggtttgaagacccttaccattatccgtgatgcg
ttgcgtatgatcaaggaaaatcatggagtagaattcgatattgattatatcccgttggat
gatcagaagacctttgagctttaccaacgtggcgaaaccaatggtacgttccagtttgag
agtccgggtatgcagaaatacctgaaagatctggtgcccgataagttcgaagacttgatt
gccatgaacgccctgtatcgtccgggaccgatcgagtacattcccgactttattgagcgt
aaacatggacgtaaagcggtagaatatgacttggccgacatggaggaatacctcttcgat
acctatgggattaccgtttatcaggagcaggtgatgttgctttcgcagaaacttgccaac
tttaccaaaggtgatgccgacgtgctgcgtaaagcgatgggtaaaaaagaccgtaaaacg
ttggataaactgaaaccgcagtttattgataatgccaaagaaaaagggcatgatgccaaa
gtgttagaaaaagtttggactgactgggaggcctttgcatcttacgcgttcaataaatcg
cactccacctgctatgcattcgttgcctatcaaactgcttacttaaaagcgcattatccg
gctgaatatatggcttcggtattaactcataccaaaggacagattgataagatcactttc
ttcatggaagagtgtaaacgtatcggtgtgccagttttgggtcctgatgtgaatgaaagt
gcgcttcactttactgcaactaagaaagggcagattcgtttcggtttgtcgggtattaaa
ggtttgggtgaagcggccattgagagtttggtgaccgaacgtaaagagaatggtccttat
gaatcggtttatgattttgccagaagagtgaatttacgtgcggttaataagaaatcatgg
gagaatttagtgtattcaggagctttcgattgctatggagagtaccatcgtgcacaatac
tttggtgtaaacatttcggatcgattaaatggtattgaacgcctggtgaaatacggaaac
gatttcgttgccaaccaaaacagcgctcagaactcattgtttggagggacggcggatgcc
catgtgccggaaccaccacttccggattcggaagagtggagtttgttgcagaagttgagt
ttcgagaaagaggttgttggaatgtacatttccggccatcctttggatgattataagctg
gaaattgagaatttctgtaattctcagataattgatttagcaactccaaaaccaggaaca
ttggtagtggcaggtattattacttcggctgaagagcgtttaaccaaacatggaaaacca
tttggcggattcactttcgaagattattcgggtagtcatcggatgattatgttttcagag
gattatctaaaaaataaacacttcttccagtcgggactattggtatttgttcgaggctcg
tttaaacctcgtttcggtcaggctgataatttagagttcaaggtggaaagcatacaatta
ctgtcggaaatacgggagaaaatggcaaagaatgttactctatcgtttccactgcatgaa
cttacgttagaatttattgataatctggaagcattatgtaaagctaatccgggtaattgt
aaactaaagttgaatgtgattgatgcacttgaacggattgtgttagatcttccttcaaaa
tcgataaaagtagatccaaataacaatttcatgagtgagattggaaagtttaagaatgta
aactttagtttgaattag
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