Solitalea lacus: L2B55_07790
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Entry
L2B55_07790 CDS
T09884
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
slas
Solitalea lacus
Brite
KEGG Orthology (KO) [BR:
slas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slas03400
]
L2B55_07790 (sbcD)
DNA repair and recombination proteins [BR:
slas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
L2B55_07790 (sbcD)
Archaeal homologous recombinant proteins
L2B55_07790 (sbcD)
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
DUF4007
Metallophos_3
Motif
Other DBs
NCBI-ProteinID:
UKJ09057
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All DBs
Position
complement(1840170..1841390)
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AA seq
406 aa
AA seq
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MKILHTADWHLGKRLERFSRLEEQREVLDEICQIANEQEVDAVLIAGDLYDTFNPSTEAT
ELLYKTLKKLSNNGKRAIIAIAGNHDSPERVDAPDVLARECGIFFAGYPNTNLGKIKLDT
GLEIINSDNGFIELKLPEHTPHLRLLLTPYANEVRLKTMLNAKNSEQELRDLLQQKWSEL
ANQYCDNTGVNILMAHLFFMKKGGEIPEEPDDEKPILHIGGAQAIFSENIPQQMQYVALG
HLHRFQTIDSSPCPVIYSSSPLCYSFSEAGQSKFVAVLTAEPGTEVKIEKIALTKGKSLV
RKRFDQIDLAIDWLSNNPDCLVELTIVSDEYLKSIDRKRLEQAHDGIVTLIPEIKNQSPT
ETANNSIDLSQDVDTLFIQYFKHKKGQEPNEELLSLFKELKAEDAE
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctacatacagcagattggcatttagggaagcgcttagaacgcttttcgcga
ttagaggaacagcgtgaagtgttagatgaaatttgccaaattgccaatgagcaagaggtg
gatgctgtattaattgccggagatttatacgatacgtttaacccttcaacagaggccact
gagcttttatataagacattaaaaaaactgtcaaacaatggcaaaagagccattatcgcc
attgccggcaaccatgattcacctgagagagttgacgcgccagatgttttggctcgggaa
tgcggaattttctttgctggctatcccaacaccaatcttggtaagataaaacttgatact
ggccttgaaatcattaattcggacaacggttttatagaacttaaactgcctgaacatacc
ccccatttacgtttgctattaactccttacgccaatgaggttagattaaaaacgatgctt
aatgcaaaaaacagtgaacaagaactccgtgatctgcttcaacaaaaatggagcgagttg
gcaaatcaatattgcgacaacactggtgtaaacatactcatggcacacttattttttatg
aaaaaaggtggagaaatacctgaagaaccagatgacgagaaaccaattttacatattggt
ggagctcaggctattttctcagaaaatatacctcaacaaatgcaatatgttgcattaggg
catttgcatcgatttcaaacaattgatagttcgccttgccctgtaatttacagtagcagt
ccgctttgttatagctttagcgaagcggggcaatccaaatttgttgccgtacttactgcc
gagccaggaactgaagtcaaaattgaaaaaattgcacttacaaaaggaaaaagtttagtt
cgaaaacgctttgatcaaatagacttggcaatagattggctctccaataatcctgattgt
ttggttgagttgacaattgtgagcgacgaatatcttaaatcaattgatcgtaagcggctt
gaacaggcacatgatggcatcgttacacttatccctgaaattaaaaatcagtcccctact
gaaacagccaacaatagtattgatttatctcaggacgtagacactttatttatccaatat
ttcaagcataaaaaaggccaggagcctaatgaagaactattaagtctattcaaagaatta
aaagcggaggatgcagaatga
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