Solitalea lacus: L2B55_07975
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Entry
L2B55_07975 CDS
T09884
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
slas
Solitalea lacus
Pathway
slas03420
Nucleotide excision repair
slas03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
slas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
L2B55_07975
03430 Mismatch repair
L2B55_07975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slas03400
]
L2B55_07975
Enzymes [BR:
slas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L2B55_07975
DNA repair and recombination proteins [BR:
slas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
L2B55_07975
MMR (mismatch excision repair)
Other MMR factors
L2B55_07975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_30
AAA_11
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
UKJ09092
LinkDB
All DBs
Position
complement(1881092..1883365)
Genome browser
AA seq
757 aa
AA seq
DB search
MSYLDKLNPTQRSAVECTEGPLMIIAGAGSGKTRVITYRIAHLINKGVDPFNILALTFTN
KAAREMRERISAIVGPDARNIWMGTFHSIFARILRVEADKLGYPSNFTIYDTDDSKSLLR
TIIKEQQLDDKLYNVNFVLNRISSAKNNLISVAEYKKNEQIQADDFSSGRSKMAELYEIY
AQRCYKAGAMDFDDLLFKTNILLKQYPDILNKYQHKFKYVMVDEYQDTNFSQYIIVKKLA
AVNRNICVVGDDAQSIYAFRGANIENILNFEKDYPELNIFKLEQNYRSTQNIVQVANSII
KNNKNQLEKNVFSENETGEKIKVIRAFSDNEEGKIVAESIAQERSLKGLNFHDFAILYRT
NAQSRSLEEALRKLNLPYKIYGGMSFYQRKEIKDLIAYFRLTINPNDEEALKRVINYPVR
GIGKTSLDKIIVLADEKNLPLWEIVSNIHLYISGRGVENVMNFATMIRSFQALAKSNSAY
DVAEHIAKQSGILRELHADKSIEGLSRYENIQELLNGIKEFSEREDIEDRSISQFLMDVA
LLTGDEKQEEEDKNTVSLMTIHSSKGLEFSHVYIVGLEENLFPSQMSLNSRQDLEEERRL
FYVATTRAEKKLTLTYATSRFKFGTLQNSEPSRFLDEVDPKFLDLDFNPAKQQKEQNPYI
DFGDERRGFTEFAAKPKISSKPKTTQLLAKAHTPTEGFAPSDTSDLQVGMEVEHERFGFG
KVINLDGKKPDIKATIFFKELGQKQLLLKFAKLRIVE
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
ttgagttatttagataaattaaatcctacgcaaagaagtgctgttgaatgcactgaaggc
ccattgatgattattgccggagcgggctctggaaaaactcgtgtaattacatatcgcatt
gcccacttaattaataaaggggttgatccgtttaatattttagccttaacgtttactaat
aaagctgctcgtgaaatgcgtgagcgtatttcagccattgtaggccccgatgcacgcaat
atctggatgggtacttttcactccatttttgcccgtatcttacgtgttgaagccgataaa
ctaggttatccgagcaatttcaccatttacgatacggacgatagcaaaagcttattacga
accatcattaaggaacaacagcttgatgataagctgtacaatgtaaacttcgttttaaac
agaatctcctctgcaaagaacaatctaatttcggttgctgaatacaaaaagaatgagcaa
atacaagctgatgatttctcttcgggcagaagtaaaatggcagagctttatgagatttat
gcccagcgttgttataaagccggagcaatggattttgatgacttgcttttcaaaaccaat
atcctattaaagcaataccctgatatactgaacaaataccagcataaattcaaatatgtg
atggttgatgagtatcaggatactaacttttcacaatatattattgtaaaaaaactggct
gcagtaaatcgtaatatttgcgttgtaggagatgatgctcaaagtatttatgcctttcgc
ggggccaatattgagaacattctcaactttgaaaaggattatcccgaactgaatatattt
aagctggaacagaattatcgctctacccaaaatattgttcaagttgccaatagcatcatc
aaaaacaataaaaatcagctcgaaaagaatgttttctctgaaaatgaaaccggagaaaaa
attaaagtaatcagagcttttagcgacaatgaagaaggcaaaattgtagctgaatcaata
gctcaggaacgaagtcttaaaggacttaactttcacgactttgcaattctgtatcgtaca
aatgctcagtcgcgttctctcgaggaagctttacgtaagctaaatcttccgtataagatt
tacggaggtatgtcattttatcagcgtaaagaaattaaggatctgattgcctacttcagg
ttaaccattaatcctaatgacgaggaagccttaaaacgtgtgatcaattatcctgtacgt
ggtattggcaaaaccagtttggataaaattatcgttttggcagatgagaaaaacctgcca
ttgtgggaaattgtatcaaatattcatttatacataagcggtcgtggggtggaaaacgtc
atgaattttgccaccatgattcgcagttttcaagcacttgccaaaagcaacagtgcttat
gatgttgcagaacatattgcaaagcaatcaggcattttgcgtgaattgcatgctgacaag
tcaattgaagggcttagccgttatgaaaacattcaggaattactaaacggtattaaagag
tttagtgaacgtgaagatatagaagaccgtagtatcagccagtttttgatggatgttgcc
cttcttaccggtgatgaaaagcaggaagaagaagataaaaatacagtgtcgttgatgacc
atacactcttcaaagggtttggaattctctcatgtgtatattgttggattagaggagaat
ttattcccttctcaaatgtccctaaactcacgtcaggatttggaagaagagcgtcgtttg
ttttatgtggctaccacacgtgctgaaaaaaaactgaccttaacttatgccaccagtcgt
ttcaaatttggcacactgcagaattctgaaccaagcagatttttggatgaagttgatcca
aaattcctcgatctggatttcaatccggcaaagcagcaaaaagaacaaaatccttatatt
gatttcggggatgaacgaagaggatttacagaatttgcggccaaaccgaaaatttcttct
aaacctaaaaccactcagttattggctaaagctcatacgccaaccgaaggttttgctcca
agtgatacctctgatttacaagtaggcatggaagttgaacatgaacgttttggttttggt
aaggtgataaatttggatggaaaaaaaccggatataaaagcaactatattctttaaggag
cttggacaaaagcagcttttacttaaatttgccaaactaaggatagttgaataa
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