Solitalea lacus: L2B55_10740
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Entry
L2B55_10740 CDS
T09884
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
slas
Solitalea lacus
Pathway
slas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
slas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L2B55_10740 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slas03019
]
L2B55_10740 (pnp)
03016 Transfer RNA biogenesis [BR:
slas03016
]
L2B55_10740 (pnp)
Enzymes [BR:
slas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
L2B55_10740 (pnp)
Messenger RNA biogenesis [BR:
slas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
L2B55_10740 (pnp)
Transfer RNA biogenesis [BR:
slas03016
]
Prokaryotic type
tRNA degradation factors
L2B55_10740 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
KH_1
PNPase
S1_RRP5
KH-I_KHDC4-BBP
HutF_N
S1_2
Motif
Other DBs
NCBI-ProteinID:
UKJ06023
LinkDB
All DBs
Position
2531964..2534156
Genome browser
AA seq
730 aa
AA seq
DB search
MSQIGITKTFDIGDGRLVSIETGKLAKQADGSVVVKMGDTMLLATVVSAKEAKPGTDFLP
LSVDYQEKYASAGRIPGGFLRREARLSDYEVLISRLVDRALRPLFPDDYHADTQVMISLI
SADKDIMPDALAALAASAAITISDIPFNGPISEVRVARIDGKFVVNPTIKELELADMDIM
LAGSAKDIVMMEGEMKECSEQDMIEAIKVGHNAIKIQVQAQLELRELTGNKPKREYNHED
NDADLKNRIREELYAKIYEVAKGGSGKDERSVAFKAVLDAFIEKETAAKGEEGLDDVTLM
LIKRYYHDIEKEAMRNMILNEGVRLDGRSVTQVRPIWSEVDYLPAAHGSAVFTRGETQSL
TTVTLGAKDDEQMIDGAIFFGYNKFLLHYNFPGFSTGEVRPNRGPGRREVGHGNLAMRAL
KQVLPVEGENPYTIRIVSDILESNGSSSMATVCAGTLALLDAGIKLKGSVSGIAMGLISD
SETGKFAILSDILGDEDHLGDMDFKVTGTANGITACQMDIKIDGLSYETLTQALNQAREG
RLHILGEMNKTLSEPREDYKPHAPRIIEMLIPREFIGAVIGPGGKVIQEMQRETGATINI
EEVGEFGKVQIFGTEKESVDKATAKIKGITTVPEIGEVYEGTVKNIQPFGAFVEILPGKD
GLLHISEIDWKRFETMDGVLEIGEKIKVKLLDIDKKTGKLKLSRKVLIPRPERPAGEKKE
NNHSQPKSEQ
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaaattggaattacaaaaacgtttgatattggtgatggaagactagtatcaatc
gaaacaggtaaactggcaaaacaagctgacggcagtgtagtggtaaaaatgggtgatacc
atgttattggctactgtcgtgtcagcaaaagaggcaaagccgggaaccgactttttacct
ttgtctgtagattatcaagaaaaatatgcatctgccggtcgtatccctggtggattttta
cgtcgtgaagctcgtctttctgactatgaagtgttaattagccgtttagttgaccgtgca
ctacgtccattgttccctgatgattatcatgctgatactcaggtaatgatcagcttaatt
tctgctgataaagatattatgccagatgcattagctgcattagctgcttctgcagcgatc
actatcagtgatattccatttaatggtccaatctctgaagttcgtgttgctcgtatcgat
ggtaaatttgttgtaaaccctaccatcaaagaacttgaattagctgatatggatatcatg
cttgccggttctgccaaagacatcgtaatgatggaaggtgaaatgaaagagtgttctgaa
caagatatgattgaggctattaaagttggtcacaatgctatcaaaattcaagttcaggct
caattagaattacgtgaattaacaggtaacaagcctaaacgtgaatataatcacgaagac
aatgatgctgatcttaaaaaccgtatcagagaagaactttatgctaaaatttacgaagta
gctaaaggtggtagcggtaaagatgaacgcagtgttgcttttaaagctgtacttgatgcc
tttattgaaaaggaaactgctgccaaaggcgaagaaggtcttgatgatgtgaccttaatg
ttgattaaacgttactaccatgatatcgaaaaagaagcaatgcgtaatatgattttaaac
gaaggagttcgtttagatggtcgtagcgtaactcaagttcgtcctatctggtcagaagtt
gattatttacctgctgcacacggttcagctgtgttcacacgtggtgaaactcaatcttta
acaactgtaacattaggtgctaaagatgatgagcaaatgatcgacggagcaattttcttc
ggttacaacaaattcttattacactacaatttcccaggtttctcaactggtgaagttcgc
cctaatcgcggtccaggtcgtcgtgaagtgggtcatggtaaccttgccatgcgcgcattg
aaacaagtattacctgttgaaggcgaaaatccttataccatccgtatcgtttctgacatt
ttagaatctaacggttcttcatcaatggcaacggtttgtgctggtactttagcattatta
gatgcaggtattaagcttaaaggttcagtttctggtatcgcaatgggtttaatctcagat
agtgaaaccggtaaattcgctattttatcagacatcttaggtgatgaagatcacttgggt
gatatggactttaaagtaaccggtactgctaatggtattaccgcttgccaaatggacatt
aaaattgatggtttatcctacgaaacattaactcaggcattaaaccaagctcgtgagggc
cgtttacatatcttgggtgaaatgaataaaaccctgtcagagcctcgtgaagattacaaa
ccacatgcaccacgtattattgaaatgctaattcctcgtgaattcatcggtgcagtgatt
ggccctggaggtaaagtaattcaggagatgcaacgtgaaaccggtgcgactatcaacatt
gaagaggttggtgagttcggtaaagtgcaaatttttggtactgaaaaagaaagcgttgat
aaagctaccgcaaaaattaaaggaatcactacagttcctgaaattggtgaggtatatgaa
ggtactgttaaaaacattcaaccttttggtgcttttgttgagattttaccaggcaaagat
ggtctattgcatatttcagaaattgactggaaacgctttgaaaccatggatggagtgttg
gaaataggagagaaaattaaagtaaaattgcttgatatcgacaagaaaacaggcaaatta
aaactttcacgtaaagtattaattcctcgtccagaacgtcctgctggcgaaaaaaaggaa
aacaatcacagtcaacctaaatcagagcaataa
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