Solitalea lacus: L2B55_10800
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Entry
L2B55_10800 CDS
T09884
Name
(GenBank) RNA polymerase sigma factor RpoD/SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
slas
Solitalea lacus
Pathway
slas02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
slas00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
L2B55_10800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slas03021
]
L2B55_10800
Transcription machinery [BR:
slas03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
L2B55_10800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
UPF0122
PgaD
HTH_28
Motif
Other DBs
NCBI-ProteinID:
UKJ06035
LinkDB
All DBs
Position
complement(2546608..2547471)
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AA seq
287 aa
AA seq
DB search
MRQLKITQSITNRESQSLDKYLHEIGKVDLITAEEEVILAQKIREGDQVALERLTKTNLR
FVVSVAKQYQNQGLTLGDLINEGNLGLIKAAKRFDETKGFKFISYAVWWIRQSILQAIAE
QSRIVRLPLNQVGSLSKISKAYSKLEQEYEREPSPEELADILETTVDKISDTLSNSGRHV
SMDAPFVQGEENTLLDVLENTDTPNTDSMLISESLSEEIKRALSTLTEREREIIVLFFGL
GSNHPLSLEEIGEKFNLTRERVRQIKDKALQRLRHTSRSKILKSYLG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagacaactaaagatcactcaatctatcactaatcgtgaaagtcaatctttagacaag
tatttacatgagatcgggaaagttgatctgattaccgctgaagaagaggtaatacttgcc
caaaaaattcgcgaaggcgatcaggtagccttggagaggcttacgaaaactaacttacgt
ttcgtagtatctgttgccaagcagtaccaaaaccaaggattaacacttggagatttgatt
aatgaaggtaaccttggccttatcaaagcagcaaaacgttttgatgaaacaaaaggtttt
aaatttatttcttatgccgtttggtggatccgtcagtccattctgcaggctatcgcagag
caatctcgtattgtccgtttgccattaaaccaggttggttcgcttagcaaaatcagcaaa
gcatattcaaaattggaacaggaatacgaacgcgagccatctccagaagaacttgctgac
atattagagactaccgttgataaaatttcggatacacttagtaactcgggacgtcatgtt
tctatggatgcaccatttgttcaaggtgaagaaaatacattacttgacgttttggagaat
actgatactccaaataccgacagtatgttaatcagtgagtctctttcagaggaaattaaa
cgtgctttatcaactttaacagaacgtgaacgtgaaattattgtacttttctttggttta
gggtcaaatcatccgctttcgttagaagagattggagagaaatttaatttgacaagagag
cgtgtacgccaaattaaagataaggctttgcaacgtttacgtcatacctctagaagtaag
atccttaaatcctatttaggataa
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