Streptococcus lactarius: J4854_03225
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Entry
J4854_03225 CDS
T07623
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
slat
Streptococcus lactarius
Brite
KEGG Orthology (KO) [BR:
slat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slat03400
]
J4854_03225
DNA repair and recombination proteins [BR:
slat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
J4854_03225
Archaeal homologous recombinant proteins
J4854_03225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
ABC_tran
R1_ABCA1
SMC_N
Motif
Other DBs
NCBI-ProteinID:
QUB39463
LinkDB
All DBs
Position
607385..610564
Genome browser
AA seq
1059 aa
AA seq
DB search
MRPVQLELTNFGPYRKEVINFTQFDHAPLFLIGGDTGAGKSTLFDAMTVALFATTSGDRN
VEEMRSTFAGSEDDLTKVTFYFQQGNHLYRIERILQQEKTKRGGGTTMQKATASLVIVDK
IGGQEIEKLGDKIKEVGEQIEQILGLNAEQFKQIILLPQNDFSRFLKEDSKTKTQILKKI
FGTGIFDRFQKSLEDRLRQSNKDMDKRQAQLDGHFASQIWSGEELAVLAQTPVSEKLARL
EEFLSQRQENLEEQKSILKDAHEDLAKLHKSLQTAQDVAKIFQELEQAKERYRQEIEEGA
QEQAEAKAHLEELQFAQGLQGTIRTLKQYQKQLNQLEQDFEIAQEALSEKQQAFEDVKSK
KEKLAAQFEDVKSKKEKLGAWKEDIIYAHSLAQEQEKIKRSSINYKQLEETYQQARKEIE
MLNKSLSDLEANRLSLESLHEAEKLLQIVDYSVENQLAQDLKEIEDLNQELTETEKRHQA
RSLEITKAQESLRKLEEELRTTLASRRQFMIAQLQAELEEGQPCVVCGALEHPNVGGAQA
DEVALKNLMNQVEELQTQKEKQAATLSNRQATLSEVESKRQDLLDQVAKAKLALEQHYQE
LKGQVAGQFDFDFSEDYETDRGQALLLKVKKYYQELQKRYDKEETDYVRYQEKIGKAQEK
ATDLAKTYQKAKVVLDQAKERLEDLQEAHPELESVEVYQERISLAHQELDIYEKQVKENG
EAYNQLHADIQGIKGRLESITKSKDKAEQDVKQLSAELERSLKAEGALTNDLEQVELWLD
EVDNQDIPKLQAQLTTYATLKQELQTQICRGQELLQNQEQPDLDSLAQAVETCQESYNQQ
HAQVLVIEKGLEDATTTYQAAKTLQDSNQEAFKAHQELSDLVKVVKGENTALTGRLNLEV
YVIRQYFQQILDYANANYIGLLTDNRYSFVLSEEGRKASDHFGLDINVYDQLTGNERSVK
SLSGGETFIAALAIALSLSEVVQNTSKGAVVEALFIDEGFGSLDKEALTKAIAVLEQIGE
NRMVGVISHVDDMKEGIAQQLAIIKSHDGSSQIKVIKKN
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgagaccagttcagttagaattgaccaattttggaccttatcgtaaggaagtcatcaat
ttcactcagtttgaccatgctcccctctttttgattggtggggacacgggggctggtaag
agtaccctctttgatgccatgacagtagctttgtttgctacgaccagtggtgatcgtaat
gtcgaagagatgcggtcaacctttgctggttcagaggatgatttgaccaaggtgactttc
tatttccaacaaggcaaccatctttatcgcatcgagcgtattctccagcaagagaagacc
aagcgaggcggtggtacgaccatgcaaaaagcgacggcttctctagtcattgtggataag
attggaggtcaagaaattgaaaaacttggggataaaatcaaggaagttggtgaacagatt
gagcagattttaggactcaatgccgagcagttcaaacagattatcctcctacctcaaaat
gattttagtcgtttcttgaaagaagattccaagactaagactcaaattttaaagaaaatc
tttggaacgggtatttttgaccgttttcaaaagagcttggaagaccgtcttcgtcagagc
aataaggatatggataagcgccaggctcagctagatggtcattttgccagtcagatttgg
tctggggaagaattggccgtcttggcccaaacgccagtctctgaaaaattggcacgtctt
gaagagtttctgtctcaacgtcaagaaaatcttgaagagcagaaaagcatcttgaaggat
gcccatgaggatttggccaaactgcataagagcttgcaaactgcgcaagatgtggcaaag
atattccaagaattggagcaagctaaggagcgttaccgtcaggaaatcgaagagggggct
caggaacaggcagaggcaaaagcgcatctggaagaattacagttcgctcaaggtctacag
ggaaccattcggaccttgaagcaatatcagaaacagttgaatcaattagagcaggatttt
gaaattgctcaagaagcattaagtgaaaagcagcaggcgtttgaggacgttaagtctaaa
aaagagaaacttgctgctcaatttgaggacgttaagtctaaaaaagagaaactgggagcg
tggaaagaggatattatctatgcccatagtcttgcccaagaacaggagaaaatcaaacgt
tcaagtattaactacaagcagttggaagaaacctatcagcaggctaggaaagagattgag
atgcttaacaagtccttgtcagacttggaggctaatcgtcttagtttagagagtttgcat
gaggccgaaaaactcctccagattgtggactacagtgtggagaatcaactggctcaggac
ctgaaagaaatagaggacttgaatcaggagttgacggagactgaaaaacgtcaccaagcc
cggtctttggagattaccaaagcccaagaaagcctcagaaaactggaagaggagttaaga
acgactttggcttcccgccgtcaattcatgattgcccaactgcaagcagagttagaggag
gggcagccttgtgtggtttgtggtgctctggaacaccctaatgttggtggagcacaggct
gatgaagtggccttgaaaaatctcatgaatcaggtggaggagcttcaaactcaaaaagaa
aagcaagccgctactttgtcaaatcgtcaggctaccttgagcgaggtcgaatctaaacgt
caggatttgcttgaccaagtggcaaaagctaagctagcattggaacagcattaccaagaa
ctgaaggggcaagttgcaggacagtttgattttgatttttcagaagactatgaaactgac
cgtgggcaagccctactcctgaaggttaagaagtattatcaagagttacaaaaacgttat
gataaggaagagacagattatgtccgatatcaagaaaagataggtaaagctcaagaaaaa
gcgacagatttggctaaaacctatcaaaaggccaaggtagtgcttgaccaagctaaagag
cgcctagaggacttgcaggaagctcacccagagcttgagtctgttgaggtatatcaagaa
cggatttcccttgctcatcaggagctagacatctatgagaaacaggttaaggaaaatggt
gaagcctacaaccaacttcatgctgacattcaaggcatcaaggggcggcttgagagtata
actaagtctaaagataaggcagaacaagacgttaagcaattatctgctgaattagagcga
agtctcaaggccgaaggggccctcaccaatgacttagagcaggtcgaactctggcttgat
gaagtagataatcaagatattcctaagcttcaggctcaattaacgacctatgcaacgctc
aaacaagaattacagacccagatttgtagggggcaagaacttctccaaaatcaagaacaa
ccagatctcgatagtctagcgcaagcagtagagacttgtcaggaaagctataatcagcag
catgctcaggttttggtaatagagaaggggcttgaggatgcgacgactacctaccaagcg
gctaagacccttcaagacagcaaccaggaggcctttaaggctcatcaagagctcagtgat
ttggtcaaggtggttaagggagaaaatacagctctaactgggcgactcaatcttgaagtc
tatgttatccgtcagtatttccaacaaatcttggattatgccaatgccaactacatcggt
ctcttaacggataatcgctattcctttgtcttgagtgaagaaggacgtaaagcgagtgat
cactttggtttagacatcaacgtctatgaccagttgacaggtaacgagcgttccgtcaaa
tccttgtctggtggtgaaacctttatcgccgcactggctattgccctatccctttcagag
gtggtgcaaaataccagcaagggtgctgttgtcgaagctctcttcatcgacgaaggcttt
ggctcactggataaggaagccctgaccaaggccatcgctgttctggaacaaatcggtgaa
aaccgaatggtcggtgtcatcagccacgtggatgacatgaaagaaggcatcgcccaacaa
ctcgctatcatcaagtcgcatgatggcagtagccaaattaaggttataaagaaaaattag
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integrated database retrieval system
