KEGG   Streptococcus lactarius: J4854_04055
Entry
J4854_04055       CDS       T07623                                 
Name
(GenBank) 3'-5' exoribonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
slat  Streptococcus lactarius
Pathway
slat03030  DNA replication
slat03430  Mismatch repair
slat03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:slat00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    J4854_04055
   03430 Mismatch repair
    J4854_04055
   03440 Homologous recombination
    J4854_04055
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:slat03032]
    J4854_04055
   03400 DNA repair and recombination proteins [BR:slat03400]
    J4854_04055
Enzymes [BR:slat01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     J4854_04055
DNA replication proteins [BR:slat03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     J4854_04055
DNA repair and recombination proteins [BR:slat03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     J4854_04055
SSDB
Motif
Pfam: RNase_T Rv2179c-like BRCT RNase_H_2
Other DBs
NCBI-ProteinID: QUB39626
UniProt: A0A9X0WMG5
LinkDB
Position
complement(790695..791615)
AA seq 306 aa
MSFSYVALDIETANDFRGSICSIGLVKFQDGTIIDTYYTLINPETSFDTFNISIHGIKPE
DVADAPTFPEVRQDIVDFIGSDIVVCHFAQFDMGALNDVYNKYQLDYDDIKYICSYRLAK
VAMPGQLNYKLKNLSKALNIQLDHHNALSDAKASGLILDHLLSANSFSDLNDFLKEYRYD
KTGLLGQRGFNRKKDPKYKDNLIYTPTEEEKAAMDPDHYFYGLYFCFTGKLERMTRKEAN
KAVALVGGIPEKGVTNHTNILVVGEQDWRVVGVDGLSSKMKKAQSLLEKGHDIEIMTEND
FIKLLK
NT seq 921 nt   +upstreamnt  +downstreamnt
atgtctttctcatatgttgctttagatattgaaactgctaatgattttagaggaagtatc
tgttcaatcggtttggtaaagtttcaagatggaactatcattgacacctactatacctta
atcaatcccgaaacaagttttgacaccttcaacatttctattcacggtattaaacctgaa
gacgttgctgatgctcctacatttccggaagtaaggcaggatattgttgattttattggt
tctgatattgttgtatgtcattttgcccaatttgatatgggagccttgaatgacgtttac
aataaatatcagttggattatgacgatataaaatatatttgttcgtatagacttgcaaaa
gttgctatgccaggacaattaaattataagttaaaaaatctttcgaaagcgttgaatatt
caattagaccatcataatgctttgtctgatgcgaaagctagtggtttaattctagatcac
ctattatcagccaactctttttctgatctcaatgactttttaaaagagtatcgttatgac
aagacaggtctacttgggcagcgtggttttaatcgaaaaaaagatcctaaatataaagat
aatcttatctatactcctacagaagaggagaaggctgcaatggatccagaccactacttc
tacggattatacttttgctttactggaaaattagaaagaatgaccagaaaagaagccaat
aaggcggtggcacttgttggtggaatcccagaaaaaggtgtaactaatcatacaaatatt
ctagttgtcggtgaacaagattggcgtgtggtcggtgtagacggtctaagtagtaaaatg
aagaaagcacaatcattgcttgaaaaaggtcatgatattgaaatcatgacagaaaatgat
ttcataaagttactaaaataa

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