Streptococcus lactarius: J4854_04345
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Entry
J4854_04345 CDS
T07623
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
slat
Streptococcus lactarius
Pathway
slat03030
DNA replication
slat03430
Mismatch repair
slat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J4854_04345
03430 Mismatch repair
J4854_04345
03440 Homologous recombination
J4854_04345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slat03032
]
J4854_04345
03400 DNA repair and recombination proteins [BR:
slat03400
]
J4854_04345
Enzymes [BR:
slat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J4854_04345
DNA replication proteins [BR:
slat03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
J4854_04345
DNA repair and recombination proteins [BR:
slat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
J4854_04345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF3053
Motif
Other DBs
NCBI-ProteinID:
QUB39679
LinkDB
All DBs
Position
829161..832280
Genome browser
AA seq
1039 aa
AA seq
DB search
MQKGEKVIAQLDTKTVYTFMESVVSLTDYVEKAKSMGYESLGIMDVDNLYGAYEFIEACE
AAHLNPLIGLEIGLELGDQTIPFRLLALSTQGYQNLMKISTSKMMGKNSWEDVKHLMQHV
AVIVPAPYASEELPLSCDYYIGVFADTPAASFTHPVLPLHTVRYFERSDLEALQMLAAIK
ENQTLTETGSMDASLALKSPQDLRKVFEVAFPQAVENLEQLVAGIHYQIDTQLKLPRFNH
KKPAVEELRELSQAGLVQKNLRGAIYQERLEQELEIIHQMGFDDYFLIVWDLLRFGRSQG
YYMGMGRGSAVGSLVAYSLGITGIDPVEKNLLFERFLNVERYTMPDIDIDIPDIYRPEFI
RYVRDRYGSYHAAQIVTFSTFGAKQAIRDVFKRFGVPEYELTSITKRIGFRDTLTTAYEK
NLAFRQVIRSRTEFKRGFEIAKRIEGQPRQTSIHAAGVVMSDQDLTDHIPLKYGEDMFIT
QYDAHAVEANGLLKMDFLGLRNLTFVQKMKEAVYEKYQEDIRIEAIDLEDPATLALFAAG
DTKGIFQFEQAGAIRLLRRVKPNHFEEVVATTSLNRPGASDYIDNFVKRKHGQEKVEILD
ASIADILEPTYGIMLYQEQVMQVAQRFAGFSLGKADILRRAMGKKNAAEMHRMEDDFIAG
AQKLGHTKEKAQEVFAIMEKFAGYGFNRSHAYAYSALAFQMAYFKVHYPDVFFDVMLNCS
SSDYLTDALQFDFKVASLSINTIPYRDKFQDRKIYLGMKNIKGFPREFAYWIIDNRPFES
VEDFILRLPNQYHKLPLLTPLVELGLFDSFEKNRRKVLQNLPNLLVFADELGSLFGDSNY
SWTETEDFSQAEKYEKEQALIGVGLSPHPLATIAQMSPFEIQPISQLEQGQQARILVEVQ
SIRTIRTKAGDLMAFLQVSDTKKKLDVTLFPETYNRFSSLIKESGFYYLSGKIQEREGHL
QMVLSEAQLATNEKFWIQLADHSQDQAILSILKKYPGPYPVVMRYEDEKKTLQLKGYPVQ
KNKELEAELKNLVMKTIYR
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaggagaaaaagtgattgcacagctagataccaaaacagtttataccttcatg
gaaagtgtggtcagcttgacagattatgtcgagaaagccaaaagcatgggctatgagtcc
ttgggaatcatggatgttgacaatttgtatggtgcttatgagtttatcgaagcttgcgag
gccgctcacctcaaccccttaatcggtctggaaattgggctggagcttggggatcaaacc
attccttttcgcttgttggccttgtcaacccaaggctatcagaacttgatgaagatttca
acgagtaaaatgatgggaaagaacagctgggaagatgtgaagcacttgatgcagcatgtc
gcagtcattgttccggctccttatgccagtgaggagttgcctttatcctgtgattactat
attggggtttttgcggatacacccgcagcctcatttacgcatcccgttctccctcttcat
acggtacgttatttcgaaaggtctgatctggaagctctccagatgcttgctgcgattaag
gaaaatcaaactttaacagaaacaggttcgatggatgcgagcttggccttaaaaagtccc
caagatttgagaaaagtctttgaagtagcctttcctcaggcggtagaaaatctagaacag
ttagtagcaggtattcattaccaaattgatacccagttaaaattgcctcgttttaaccat
aaaaaaccagcagtagaagaactgagagaattgtcgcaagcaggtcttgttcagaaaaac
ttaagaggtgcaatctaccaggaacgattggagcaggagttagagattattcaccaaatg
ggctttgatgattatttcttgattgtctgggacctccttcgtttcggacgctctcaaggc
tattacatgggaatgggacgtggatctgctgtaggctcactagttgcctattccctaggg
attacagggattgaccctgtggagaagaacctcctctttgagcgctttttaaatgtggag
cgctataccatgccggatattgatattgatattcctgatatctatcgtccagaatttatc
cgctatgtgagagaccgttatgggagttaccatgcggctcagattgtaaccttttcaacc
tttggcgcgaagcaagccattcgcgatgtctttaaacgctttggagttcctgagtacgaa
ctgacctctattaccaagcgtattggttttagagatacattgacgaccgcttatgagaag
aacctggcctttcgacaagtaatccgtagccgaacggaatttaagcgtggctttgagatt
gcaaaaagaatcgagggccaacctagacagacttcgatccacgcggctggggtcgtgatg
agtgaccaagatttgaccgatcatattcctctcaagtatggagaggacatgttcattacc
cagtatgatgcccatgcagtagaggccaatggtctgttgaaaatggactttttaggcttg
cgcaatttaacctttgttcaaaaaatgaaggaagcagtctatgaaaagtatcaagaagat
atacgaatagaagccattgatttagaggatccagcaacgctggccttgtttgcggctggg
gataccaaggggattttccaatttgaacaggctggggccattcgtcttttgaggcgtgtg
aaacccaatcattttgaagaagtggtagcgaccacctctctcaatcgtccaggagctagt
gattacattgacaattttgtaaaacgaaaacatggccaagagaaggtggaaattttagat
gcctctatcgcagatatcttagagcctacctatgggattatgctttaccaagagcaagtg
atgcaggtggctcagcgctttgcaggatttagccttgggaaagccgatatcttacggcgc
gccatgggcaaaaaaaatgctgcagaaatgcacaggatggaagatgatttcatcgcaggg
gctcaaaaactcggtcataccaaagaaaaagctcaagaagtctttgccatcatggaaaaa
tttgccggctatggttttaaccggtcccatgcctatgcctactctgccttagcttttcaa
atggcttatttcaaggttcattatccagacgttttcttcgatgttatgctcaattgttcg
agcagtgactatctgacagatgcgctccagtttgactttaaagtagcttccttatcgatt
aataccattccatacagggataagtttcaagatagaaaaatctacttaggcatgaaaaat
atcaagggatttccgagagagtttgcctattggatcatcgacaatcgtccttttgaaagt
gtcgaagatttcattttacgacttccaaatcagtatcacaaattgcctttattaactcct
ttggtcgagcttggcttatttgatagttttgagaaaaaccgacgcaaagtccttcaaaat
ttaccgaatttgttggtctttgcggatgaattgggtagtctgttcggggattccaattac
tcttggacggagacagaagactttagccaagctgaaaaatatgagaaagagcaagctctt
atcggggttggattaagtcctcatcccttagccactattgcgcaaatgagtccttttgag
atccagcctatctcgcaactggagcaaggccaacaagctcggattttggtggaagttcaa
tccatccgaacgattcggacgaaggcaggggatctcatggctttcctacaagtcagtgat
accaagaaaaaattggatgtgacccttttcccagaaacctacaatcgattttcttctttg
atcaaagaaagtggcttttattacttgtctgggaaaatccaagaacgagagggtcacttg
caaatggttctatcagaagcgcaattagcgaccaatgagaaattctggattcaattggct
gaccacagtcaggatcaggccattctttcgattttgaaaaaatatcctggtccttaccca
gttgtgatgcgctatgaagatgaaaagaaaaccttgcaactgaaagggtatccagttcaa
aaaaacaaagagttagaagcagaactcaagaatctggttatgaaaacgatttatcgataa
DBGET
integrated database retrieval system
