Streptococcus lactarius: J4854_07360
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Entry
J4854_07360 CDS
T07623
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
slat
Streptococcus lactarius
Brite
KEGG Orthology (KO) [BR:
slat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slat03032
]
J4854_07360 (gyrB)
03400 DNA repair and recombination proteins [BR:
slat03400
]
J4854_07360 (gyrB)
Enzymes [BR:
slat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
J4854_07360 (gyrB)
DNA replication proteins [BR:
slat03032
]
Prokaryotic type
DNA Topoisomerases
J4854_07360 (gyrB)
DNA repair and recombination proteins [BR:
slat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
J4854_07360 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QUB38357
LinkDB
All DBs
Position
complement(1459776..1461725)
Genome browser
AA seq
649 aa
AA seq
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MTEDKQQEMQAQEYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEIVDNSIDEAL
AGFASHIEVFIEPDNSITVVDDGRGIPVDIQKKTGRPAVETVFTVLHAGGKFGGGGYKVS
GGLHGVGSSVVNALSTSLDVRVYKNGNIYYQEYQRGHVVDDLKIIGEADRTGTTVHFVPD
PEIFTETTVYDFDTLNKRIQELAFLNRGLRISLTDKREGMNQEKHYHYEGGIASYVEYIN
ENKDVIFETPIYTDGEMDDITVEVAMQYTTDYHETVMSFANNIHTHEGGTHEQGFRTALT
RVINDYAKKNKLLKENEDNLTGEDVREGLTAVISVKHPNPQFEGQTKTKLGNSEVVKITN
RLFSDAFSDFLLENPQIAKKIVEKGILAAKARVAAKRAREVTRKKSGLEISNLPGKLADC
SSNNPQETELFIVEGDSAGGSAKSGRNREFQAILPIRGKILNVEKASMDKILANEEIRSL
FTAMGTGFGAEFDVTKARYHKLVLMTDADVDGAHIRTLLLTLIYRYMKPVLEAGYVYIAQ
PPIYGVKVGSEIKEYIQPGTNQEAQLTAALERYSEGRSKPTIQRYKGLGEMDDHQLWETT
MNPEHRLMARVSVDDAAEADRIFDMLMGDRVEPRREFIEENAEYSTLDV
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgacagaggataaacagcaagaaatgcaagcgcaagaatatgatgcgagtcaaattcag
gtcttagaaggtcttgaagcggttcggatgcgtccaggtatgtatattggctcaacctca
aaagagggtcttcatcacttggtttgggaaatcgttgataactcgatcgatgaagccttg
gccggttttgccagccatattgaagtattcattgaaccggataattccattaccgttgtc
gatgatggacgtgggatccctgtagacattcagaaaaagacaggccgtccggccgttgaa
accgtctttacagtccttcacgccggaggaaaattcggcggaggtggctacaaggtttct
ggtggtcttcacggggtaggatcatctgttgtcaacgccctttcgacctcgctggatgtg
cgtgtctataaaaatggaaatatctattatcaagaataccaacgtgggcatgtggttgat
gatttgaaaattatcggggaggcagatcggacaggaaccactgttcactttgtaccagat
cctgaaatctttacagaaacaacagtgtatgattttgatacattgaacaaacggattcaa
gaattagccttcttgaaccgaggcttgcgtatttccttgaccgacaagcgtgagggaatg
aaccaagaaaagcattaccactatgaaggtgggattgcaagttatgtggaatacatcaac
gaaaataaagatgtcatttttgaaacaccgatctacacagacggtgaaatggatgacatc
accgttgaagtagccatgcaatatacaacagactaccacgaaaccgtcatgagttttgcc
aataacatccatacgcatgaaggtggaacccatgagcaaggcttccgtacagctttgacg
cgtgtcatcaatgattatgctaagaaaaataaacttctaaaagaaaatgaagacaacctg
acaggtgaggatgttcgggaagggttgacagctgttatctcagtaaaacatccaaatcca
cagtttgaagggcaaaccaagaccaagctcgggaattctgaggtcgtaaaaatcacgaat
cgcctctttagcgatgctttctctgatttccttttggaaaatccacaaattgcaaagaaa
attgttgaaaaagggattttggctgccaaagctcgcgtagcggccaagcgtgcacgggaa
gtgacccgtaagaaatcaggccttgaaatttccaatctgcctggtaaattggcagactgt
tcgtcaaacaatccgcaagaaacagaactctttatcgtcgaaggggattcagcaggagga
tctgctaaatcagggcgtaatcgggaattccaagcgatccttcctattcgcgggaaaatc
ttgaacgttgaaaaagcaagtatggacaagattcttgccaatgaagaaattcgtagctta
tttactgctatgggaactggtttcggtgccgaatttgatgtgacaaaggctcgttaccat
aagttggtgttgatgacggatgccgatgtagatggggcccacattcgaacccttctctta
accctcatttatcgctatatgaaaccagttctagaagctggttatgtctatatcgctcaa
ccaccgatctatggcgtcaaagttggaagtgaaatcaaagagtatatccaacctggtacc
aaccaagaagctcaattgacagcagctttagaacgatattcagaaggtcgttcaaaacca
acaatccaacgctacaaaggtctgggtgaaatggatgaccatcaattatgggaaacaacc
atgaatcctgagcaccgcttgatggcgcgtgtatctgtagatgacgcggcagaagccgat
aggatttttgatatgttaatgggagatcgagtggaacctcgccgtgaatttatcgaagaa
aacgctgaatatagtacacttgatgtataa
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