KEGG   Streptococcus lactarius: J4854_09300
Entry
J4854_09300       CDS       T07623                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
slat  Streptococcus lactarius
Pathway
slat03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:slat00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    J4854_09300
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:slat03019]
    J4854_09300
Messenger RNA biogenesis [BR:slat03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     J4854_09300
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B RMMBL Lactamase_B_2 Anti-Pycsar_Apyc1 Lactamase_B_6 Permuted_GreAB-C DUF4453 pre-PUA_NIP7
Other DBs
NCBI-ProteinID: QUB38727
UniProt: A0A9X0WQ03
LinkDB
Position
1894307..1895989
AA seq 560 aa
MAYTLKSEEVGVFAIGGLGEIGKNTYGIEYQDEIIIVDAGIKFPEDDLLGIDYVIPDYSY
IVDNIDRVKAVLITHGHEDHIGGIPFLLKQANVPIYAGPLALALIRGKLEEHGLLRDAKL
YEINQNTELQFKNLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDFTPVGEPADLH
RMAALGEEGVLCLLSDSTNAEVPTFTNSEKVVGQSIMKIIEGIHGRIIFASFASNIFRLQ
QAAEAAVKTGRKIVVFGRSMEKAIVNGIELGYIKVPAGTIIEPSEIKDYAANEILIMCTG
SQGEPMAALSRIANGTHRQVQLQPGDTVIFSSSPIPGNTTSVNKLINTISEAGVDVIHGK
INNIHTSGHGGQQEQKLMLRLIKPKYFMPVHGEYRMQKIHAGLAKDTGVEKDNIFIMSNG
DVLALTANSARIAGSFNAQDIYVDGNRIGEIGAAVLRDRKDLSEDGVVLAVATVDFKSKM
ILAGPDILSRGFIYMRESGDLIRESQRLLFNAIRIALKNKDASIQTVNGAIVNALRPFLY
ESTEREPIIIPMILTPDDEN
NT seq 1683 nt   +upstreamnt  +downstreamnt
atggcttataccttaaaatctgaagaagttggtgtatttgccattggtggacttggagaa
atcgggaaaaatacctacgggatcgaataccaagatgaaatcatcattgtcgatgccggg
atcaaatttccagaagatgacctccttgggatcgactatgtcatcccagattactcttat
atcgttgacaatatcgatcgcgtcaaagcggtcctcattacccacggacacgaagaccac
atcggtgggattcctttccttttgaagcaagccaatgtccctatctacgctggacctttg
gcgcttgccttgatccgtggaaaattagaagagcacggccttcttcgtgatgccaaactc
tacgaaatcaaccaaaacactgagcttcaatttaaaaatcttaaagcaaccttcttccgt
acgactcactcgattccagaacctttagggattgtgattcacactcctcaaggtaagatt
gtctgtaccggagacttcaaattcgacttcacacctgttggggaaccggctgacctccat
cgtatggcggcccttggggaagaaggcgttctctgcctgctctcagactcaaccaacgca
gaagtcccaacctttaccaactctgaaaaagtagttggccaatccatcatgaagatcatc
gaaggcatccacgggcgtatcatctttgcctccttcgcttcgaatatcttccgtctccaa
caagctgctgaagcggctgtcaagaccggtcgcaagatcgtcgtctttggacgctccatg
gaaaaagccattgtcaatgggattgagcttggctacatcaaagtccctgctggaaccatt
atcgagcctagtgagatcaaagattatgcagccaatgagatcctgatcatgtgtacagga
agccaaggagaacccatggcagccctctctcggatcgctaacggaacgcaccgccaagtg
caactccaaccaggagacactgtgatcttctcttctagtccgattcctggaaatacaacc
agtgtcaacaaactgatcaatacaatttccgaagcgggagtcgatgtcatccacgggaag
atcaacaacatccatacctctggacacggtggtcaacaagaacaaaaactcatgcttcgc
ttgatcaagccaaaatacttcatgcccgtccacggtgagtaccggatgcaaaagatccac
gcaggacttgccaaagatacgggtgttgaaaaagacaatatctttatcatgagcaatggt
gatgtactcgctcttacagccaactctgctcggatcgcaggaagctttaacgcccaagac
atctatgtcgatggaaatcgtatcggtgaaatcggtgctgcagtccttcgtgaccgcaaa
gacctttccgaagatggggttgtccttgccgtcgcaacagtcgactttaagtctaagatg
atcctagcaggcccagatatcttgagccgtgggttcatctacatgcgtgaatcaggagat
ctgatccgtgaaagccagcgcctgctctttaacgcgatccgcatcgcactgaagaataaa
gatgccagcattcaaaccgtcaatggagcgattgtcaacgcccttcgtccattcctgtac
gaaagcacggaacgtgaacctatcattatcccaatgattctcacaccagatgacgaaaat
taa

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