Streptomyces laurentii: SLA_3231
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Entry
SLA_3231 CDS
T05205
Name
(GenBank) rtcB protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
slau
Streptomyces laurentii
Brite
KEGG Orthology (KO) [BR:
slau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slau03016
]
SLA_3231
Enzymes [BR:
slau01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
SLA_3231
Transfer RNA biogenesis [BR:
slau03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
SLA_3231
Prokaryotic type
tRNA splicing ligases
SLA_3231
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
BAU84145
UniProt:
A0A160P0R2
LinkDB
All DBs
Position
complement(3386650..3387843)
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AA seq
397 aa
AA seq
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MSYIEVPGAKVPIRMWADPASVEEGAMRQLQNTATLPWIKGLAVMPDVHYGKGATVGSVI
AMHGAVCPAAVGVDIGCGMSAVKTSLTANDLPGDLSRLRSKIEQAIPVGRGLHREMVDPT
RLYAFPTTGWGDLWSRFDGVADAVKFRRERAEKQAGTLGSGNHFIEVCLDESGSVWLMLH
SGSRNIGKELAEYHIGEAQKLPHNQGLVDRDLAVFVSDTPQMVAYRNDLFWAQEYAKYNR
AIMMALFQEVLRREFRKAKVTFDPVISCHHNYVAEERYEGMDLLVTRKGAIRAGSGEYGI
IPGSMGTGSFIVKGLGNAASFNSASHGAGRRMSRSAAKRRFSTRDLEEQTRGVECRKDSG
VVDEIPGAYKPIEQVVEQQRDLVEVVAKLKQVVNVKG
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacatagaggtaccgggcgcgaaggtgcccatccgcatgtgggcggatcccgcc
tccgtcgaggaaggcgcgatgcgccagctccagaacacggccaccctgccgtggatcaag
ggcctcgccgtgatgccggacgtgcactacggcaagggagcgacggtcggctcggtgatc
gcgatgcacggggcggtctgcccggcggcggtcggcgtggacatcggctgcggcatgtcc
gcggtcaagacctcgctgaccgcgaacgacctccccggcgacctctcccgcctccgctcc
aagatcgaacaggctatcccggtcggccgcggcctccaccgcgagatggtggacccgacc
cgcctgtacgccttcccgacgacgggctggggggatctgtggtcgcgcttcgacggggtg
gcggacgcggtgaagttccgtcgcgagcgggcggagaagcaagccggaaccctaggatcg
ggtaatcattttattgaagtttgtctcgatgagtccggttctgtctggctcatgctgcac
tcgggctcgcggaacatcggcaaggaactggccgagtaccacatcggcgaggcgcagaag
ctgccccacaaccagggtctcgtcgaccgcgacctcgccgtcttcgtctcggacaccccg
cagatggtggcctaccggaacgacctcttctgggcgcaggagtacgcgaagtacaaccgc
gcgatcatgatggcgctgttccaggaggtcctccgccgggaattccgcaaggcgaaggtc
accttcgacccggtgatctcctgccaccacaactacgtggcggaggagcgctacgagggg
atggacctactggtcacccgcaagggcgcgatccgggccggctccggggagtacgggatc
atcccgggatcgatgggcacgggttcgttcatcgtgaaggggctcggcaatgcggcgtcc
ttcaactcggcctcgcacggggccggccgtcggatgagccggagcgcggccaagcggcgg
ttctccacgcgcgacctggaggagcagacgcggggcgtggagtgccgcaaggactccgga
gtcgtggacgagatcccgggcgcctacaagccgatcgagcaggtcgtggagcagcagcgg
gacctggtcgaggtggtcgcgaagctcaagcaggtcgtcaacgtgaagggctga
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