Streptomyces laurentii: SLA_4275
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Entry
SLA_4275 CDS
T05205
Name
(GenBank) 2-5 RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
slau
Streptomyces laurentii
Brite
KEGG Orthology (KO) [BR:
slau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slau03016
]
SLA_4275
Enzymes [BR:
slau01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
SLA_4275
Transfer RNA biogenesis [BR:
slau03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
SLA_4275
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
BAU85163
UniProt:
A0A160P3P1
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All DBs
Position
4446248..4446820
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AA seq
190 aa
AA seq
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MRLFAAVVPPPAQLAELAREVDLLAGLPDARRLRWTSRPGWHFTLAFMGEVDDELLPDLR
ARLGRAARRTAPFPLRLHGGGHFGRAVLWTGAAGGLDELRLLAERADAAARRAGVPMDEH
RRYQAHLTVARSRTNDLDLRPFVAALDDFEGHRWQVGQLALVRSNLPGGGTPGEQPRYET
VGAWPLGGSG
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgttcgccgccgtcgtcccgccgcccgcgcagctggccgagctggcccgcgag
gtcgatctgctcgccggtctgcccgatgcccgccggctgcgctggacctcgcggcccggc
tggcacttcacgctcgcgttcatgggcgaggtcgacgacgagctgctgccggacctgcgt
gcccggctgggccgggcggcccgccggacggcgccgttcccgctgcggctgcacggcggc
ggccacttcggccgtgcggtgctgtggacgggcgcggcgggcggcctggacgagctgcgg
ctcctcgccgagcgggccgacgcggcggcgcgccgggccggggtgccgatggacgagcac
cgccgctaccaggcgcacctcacggtggcccggtcccgtacgaacgacctggacctgcgg
cccttcgtcgccgcgctcgacgacttcgagggccaccgatggcaggtggggcagctggcg
ctggtgcgcagcaacctgcccgggggcggtacgccgggggagcagccgcgctacgagacg
gtcggggcgtggccactcggcgggtcgggttaa
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