Streptomyces laurentii: SLA_5078
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Entry
SLA_5078 CDS
T05205
Name
(GenBank) RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
slau
Streptomyces laurentii
Brite
KEGG Orthology (KO) [BR:
slau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slau03021
]
SLA_5078
Transcription machinery [BR:
slau03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SLA_5078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
MarR_2
HTH_24
NirdL-like_HTH
HTH_10
HTH_AsnC-type
HTH_3
DUF7343
HTH_Crp_2
MarR
Sigma70_ECF
IF2_N
GerE
HTH_AraC
DUF4423
Motif
Other DBs
NCBI-ProteinID:
BAU85960
UniProt:
A0A160P5L6
LinkDB
All DBs
Position
complement(5247597..5248616)
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AA seq
339 aa
AA seq
DB search
MRNGEATAGVPEQQARPRPEAGADEVATDHAEQADQMSEHEQHGAAPKEPSAPGGHESER
AADAGRDEHAGETAEDRAGHAAGHKAADPHDRSGARALFVELRDLPEGSPERAELRDRLV
RMHLPLVEHLARRFRNRGEPLDDLTQVATIGLIKSVDRFDPDRGVEFSTYATPTVVGEIK
RHFRDKGWAVRVPRRLQELRLSLTTATAELSQQHGRSPTVHELAERLGISEEEVLEGLES
ANAYSTLSLDVPDTDDESPAVADTLGAEDEALEGVEYRESLKPLLEDLPPREKRILLLRF
FGNMTQSQIAQEVGISQMHVSRLLARTLAQLRDKLLVEE
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtgaggaacggggaggcgacggccggcgtccctgaacagcaggcacggccgcgtccggag
gccggggccgacgaggtcgctacggatcacgcggagcaggcggaccagatgagcgagcac
gagcagcacggcgcggcgccgaaggaaccgtccgccccgggcggccacgagagcgagcgc
gcggccgacgcgggccgcgacgagcacgccggagaaaccgccgaggaccgggccgggcac
gcggcgggtcacaaggccgccgatccgcacgaccgcagcggggcccgggccctcttcgtc
gagctgcgcgacctgccggagggctcccccgagcgcgccgagctgcgcgaccggctggtc
cggatgcatctgccgctggtggagcacctggcccggcgcttccgcaaccggggcgagccg
ctcgacgacctgacccaggtggcgacgatcggcctgatcaagtcggtggaccggttcgac
ccggaccgcggggtggagttctccacgtacgcgaccccgacggtggtcggcgagatcaag
cggcacttccgcgacaagggctgggcggtacgggtgccgcgccggctccaggagctgcgg
ctctcgctgacgacggcgaccgcggagctgtcccagcagcacgggcgctcaccgacggtg
cacgagctggcggaacggctcgggatctccgaggaggaggtcctggaggggctggagtcg
gcgaacgcctactcgacgctctccctggacgtgccggacacggacgacgagtcgccggcg
gtcgcggacaccctgggcgcggaggacgaggcccttgagggggtcgagtaccgggagtcc
ctcaagccgctcctggaggacctgccgccccgtgagaagcggatcctgctgctgcgtttc
ttcgggaacatgacacagtcgcagatcgcgcaggaggtcggcatctcgcagatgcacgtg
tcccggctgctcgcgcgcaccctcgcgcagctgcgggacaaactcctcgtggaggagtga
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