Streptomyces laurentii: SLA_5900
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Entry
SLA_5900 CDS
T05205
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
slau
Streptomyces laurentii
Brite
KEGG Orthology (KO) [BR:
slau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slau03016
]
SLA_5900
Enzymes [BR:
slau01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
SLA_5900
Transfer RNA biogenesis [BR:
slau03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
SLA_5900
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
BAU86769
UniProt:
A0A160P4Y5
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All DBs
Position
complement(6212439..6213716)
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AA seq
425 aa
AA seq
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MTEAQDTASDTALRTTGGAPSDDEVPAHGLPTPLLEPREGIPPVVAGEDALADVIAAFAG
GRGPVAVDAERASGYRYGQRAYLVQIRREGAGTALIDPVGCPDLSGLGEALTGTEWILHA
ATQDLPCLRDIGMRPSRLFDTELAGRLAGFPRVGLGAMVESVLGYALEKGHSAVDWSTRP
LPDPWLRYAALDVELLVDLRDQLERELDRQGKLGWALEEFSAIASAPPAPPRKDPWRRTS
GMHKVRRRRQMAVVRELWTARDKVAQRRDVSPGKVLSDAAIVEAALALPPNANALGSLPG
FGQRMSRRQLEQWQAAVDRAKALPEVELPQPGQALAGPPPPRAWADKDPAAAARLSAARA
AVSALAEQLHLPPENLITPDTVRRVCWEPPAPADPDTIAAALAGHGARPWQIHLVTPLLA
AALAG
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgaagcccaagacaccgcgagtgacaccgcactacgaaccaccgggggcgccccc
tcggacgacgaagtccctgcgcacgggctgccgacccccctgctcgaaccccgcgagggc
atcccgcccgtcgtcgccggcgaggacgccctcgccgacgtgatcgcggccttcgccggc
ggtcgcggcccggtcgccgtcgacgccgagcgggcctccggataccgctacgggcagcgg
gcctatctcgtccagatccgccgcgaaggcgcgggcaccgcgctgatcgacccggtgggc
tgcccggacctctccggtctcggcgaggcgctgaccggcaccgagtggatcctgcacgcc
gcgacccaggacctgccgtgcctgcgcgacataggcatgcggccctcgcggctcttcgac
accgagctggccggccggctcgccggcttcccccgggtcggcctcggcgcgatggtcgag
tccgtcctcgggtacgccctggagaagggccactccgccgtcgactggtccacccgcccg
ctgcccgacccctggctgcgctacgcggcgctcgacgtcgagctgctcgtcgacctgcgc
gaccagctggagcgggagctggaccggcagggcaagctgggctgggcgctggaggagttc
agcgccatcgcgtccgccccgcccgccccgccccgcaaggacccgtggcgccgtacgtcc
ggcatgcacaaggtacgccggcgccggcagatggcggtcgtacgggagctgtggacggcc
cgcgacaaggtggcccagcgtcgcgacgtctcccccggcaaggtgctgagcgacgcggcg
atcgtcgaggccgccctggcgctgccgccgaacgcgaacgccctgggttcgctgcccggc
ttcgggcagcggatgagccggcgccagctggagcagtggcaggcggccgtggaccgggcc
aaggcgctgcccgaggtggagcttccgcagcccggccaggcgctggcgggtccgcccccg
ccgcgggcctgggcggacaaggaccccgccgcggcggcccggctgtccgcggcccgcgcg
gcggtctcggccctcgccgagcagctgcacctgccgccggagaacctgatcaccccggac
acggtccgccgggtgtgctgggagccgcccgccccggccgatccggacaccatcgccgcc
gccctggccgggcacggcgcccgtccctggcagatccacctggtgaccccgctcctcgcg
gccgctctggcgggctga
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