Sugiyamaella lignohabitans: AWJ20_1010
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Entry
AWJ20_1010 CDS
T05270
Symbol
RIA1
Name
(RefSeq) GTPase RIA1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
slb
Sugiyamaella lignohabitans
Pathway
slb03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
AWJ20_1010 (RIA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slb03009
]
AWJ20_1010 (RIA1)
Ribosome biogenesis [BR:
slb03009
]
Eukaryotic type
Pre-60S particles
GTPases
AWJ20_1010 (RIA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFG_C
EFL1
EFG_III
GTP_EFTU_D2
EF-G_D2
EFG_IV
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
30032766
NCBI-ProteinID:
XP_018735219
UniProt:
A0A167DC20
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Position
A:join(3193133..3196177,3196538..3197725)
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AA seq
1410 aa
AA seq
DB search
MPVAADNLIRLQRQPDLTRNICILAHVDHGKTSLSDCLLATNGIISQNLQGKIRYLDSRP
DEQTRGITMESSAISLYFRVAKRPTITDSDDSATPAAPVIKEYLINLIDSPGHIDFSSEV
SAASRLCDGAVVLVDVVEGVCSQTVTVLRQSWVEKLKPILVLNKMDRLITDLQLTPMEAY
QHITKLIEQVNAVVGSFFAGQRMEDDLKWRESNENRGADAQQEFVEAVDEELYFAPEKNN
VVFGSAVDGWGFNISQFAAIYERKLGIKREKLEKVLWGDFYFDPKTKKVLPGSSSSLKGR
NYRPLFVQLVLENIWAIYDSTILNKNTDKINKIVNALDLKVMPRDITSKDSKSLLGTIFN
QWIPISRSILLSVIDIIPSPVKAQKERMPDILSNTPGNKSISPKVADSMINCDPNEHLTA
FISKVIAVREKDLPVKRISGQLSAEERIAELRNKSRHAREIALSQDAGLEESVQMLSVDN
DGENTEDESREVVIGFSRVFSGTLKAGQEVYLLGPRYNPSVPEKYITKLTISNLYILMGR
DLILIDEAPAGTIVGIGGLDGHILKSGTLADVATGSPNLASSNGIAAPILKVAIEPINPS
KLPELEAGLRLLNASDPCVQVSIQENGEHILATAGELHLERCIKDLQERFARIDVHYSKP
VVPFRETIVETKDWKSQNGNPRGYAEIKIGSVTLKLRVFPLSAEVSEFLNSNANKLRSIA
DKQKKPILNPGDNDSVNSDEKVFDVELDEEDTSLADTEFKDSDLKTVQYQLEEKIKNDKA
LRRFIQAPWSSIVSFGPRKIGSNILFDESKTFSRLLFSETDSVRSEYEDNIITGFQLAVS
QGHLCGEPVTGVGCAITEVSIDETEGADGSSVALQRRVISATKQAIYDGLTDWSPRLMLA
TYLCDIQATTEVLGKVYGVITKRKGKIITEEMKEGTPFFTVHASIPVVEAFGFSEEIRKR
TSGAANPQLVFNGFEIFDQDPFWVPSTEEELEELGELADKENIALSYVTSVRKRKPETAL
IPEAPLDCAIPEPDSPLLPAPEPFPEPEPEPEPLPAPEPLPDPEPEPLPLPAPEPDPEPL
PAPEPEPEPLPAPEPEPEPEPEPLPAPEPLPDPEPEPEPLPTPEPLPDPEPEPLPLPAPD
PEPLPEPLPAPEPEPEPLPAPEPLPEPEPEPLPAPEPLPDPEPEPDPDPLPDPEPPLPAP
EPLPEPEPFPLPLPLPFPLPFPPLGQSLQLKVGSPEAVLLVCEPPLLEPAEAEVANVELA
AAPLPDVVEDELLAPFPPAVEVRSVLEEEEADSDALDPPLGQSLQPKVGPEAEAEAEAEP
VAEAEAPAETEPPAKPVAEAEAEAEAEAEAEAETEAEAEAEAEAEAEAEAEAEAEAPAEA
EAEAEAPAEAELEPPFGQSLQAKVGPAEDD
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atgccagtagcagctgataacttgatcaggcttcaacgacagcctgatctgactagaaac
atttgcattttagctcatgttgaccatggtaaaacctctttatccgattgcttattggca
accaatggtattatttctcaaaacctccagggaaaaatccgctatttagattctcgtcct
gatgaacagacaagaggaattacaatggaatcgtcggcaatttctctgtactttcgagtt
gctaaacggcctactataacggactctgacgactctgccaccccggctgcaccagtcatt
aaagaatatctcattaatttaattgattctcctggtcatattgacttctcatctgaagta
tcggcggcatctcgtctatgtgatggtgctgtagtgctggtcgatgttgttgaaggtgtt
tgttctcaaacggttactgttttaaggcagagctgggttgaaaaattaaagccaattctt
gttttaaataaaatggatcgtcttattacggatcttcaattaactccaatggaggcatat
cagcatatcactaaactaattgaacaggtcaatgccgtagtgggttcgttttttgcgggc
cagagaatggaggatgacttgaaatggagagaatcaaatgaaaatagaggtgctgatgct
caacaggagtttgtcgaagctgtagatgaagagttatatttcgctcccgagaaaaataat
gtggtatttggcagcgcagtcgacggttggggcttcaatatctctcagttcgcagctata
tacgagcgcaagttaggcataaaaagagaaaagctagaaaaagttctttggggagacttt
tactttgaccccaagaccaaaaaggtacttccaggatcatctagcagtttaaagggccgc
aattatcgcccattatttgttcaattagttttagaaaatatttgggccatctatgattcg
acgattctgaacaaaaacacggacaaaatcaataaaattgtcaatgctctggatcttaaa
gtgatgccaagagatattacatctaaagactccaagtcactactgggcaccattttcaat
caatggatccccatttcaagatctattttgctcagtgtcattgatatcataccttctcca
gtcaaagcccaaaaggagcgaatgcctgatatcttgtcaaatactcctggaaataaaagc
atatctcccaaagtggctgattctatgataaactgtgatcctaatgaacacttgacagcg
tttatatcaaaggtaattgctgttcgtgaaaaggacttgccagtgaagaggatttctggt
cagctaagtgcggaagaacgaattgctgagctaaggaacaagagccgccatgccagagaa
attgccttgtcacaagatgctgggcttgaggagtcagtacaaatgctctctgtagataat
gatggcgaaaataccgaagacgaatcacgtgaagtggtaattggcttttcgcgagttttc
agtggaactttgaaagctggtcaagaagtttatctccttggcccaagatacaacccatct
gtacctgaaaaatacatcacgaagctgactatttcaaatctgtacattctcatgggaaga
gatttgattctcattgatgaagctcccgctggaacgatagtcggtatcggagggttggat
ggccatattctcaagagtggcactttagcagatgtagccactggtagccctaatcttgcg
agctcaaatggtatcgctgcccccattctcaaagttgcaattgagcctattaacccctcc
aaattgccagaacttgaagctggcttgcggttattaaatgcctctgatccatgtgtccag
gttagtattcaagaaaatggcgaacatattctagccactgccggtgagttgcatttggaa
cgatgcatcaaggatcttcaagagagatttgccaggattgatgttcattattctaaacca
gtcgtaccctttagagagaccatagtcgagaccaaagattggaagtctcagaatggtaat
cctagaggctatgcggaaattaaaattggctcagtaactttgaaactaagagtattccct
ttgtcggccgaagtcagtgaatttttaaacagcaatgccaataagttaaggtctatagcc
gacaaacagaagaagcctattttaaaccctggtgataatgacagtgtcaattccgatgaa
aaggtatttgatgttgaacttgatgaagaggatacgtctctcgccgacactgaattcaag
gactctgatttgaagactgttcaatatcaattagaagaaaagataaaaaacgataaagct
cttaggcgttttattcaagcaccgtggagtagcattgtaagctttggtcctagaaaaatt
gggtcaaacattctttttgatgaatcgaaaacattttcacggcttttgtttagtgaaacc
gattctgttaggtctgagtatgaagataacattattaccggtttccagcttgcggtatca
cagggtcatttatgcggtgagcctgtcaccggtgtaggttgtgcgatcactgaagtttct
attgacgaaacagagggtgccgatggtagttcggttgctctacagagacgggtaatatct
gcaacgaaacaggccatttacgacggtttgaccgattggtctcccaggctcatgttggct
acttatctttgtgatattcaggctaccactgaggtactgggaaaggtctatggagttata
acgaaacgtaaaggaaaaattattactgaggagatgaaagaaggtactccttttttcaca
gtacacgcctcaatccctgtggtcgaagcatttggcttttctgaagagattcgcaagagg
acgtctggtgcagcaaacccgcaacttgtatttaacggatttgaaatctttgaccaagac
cccttctgggtcccctctactgaagaagaacttgaagaacttggtgaattggcagacaaa
gaaaacatcgcactttcttatgttaccagtgttcgcaagcggaagcccgagactgctcta
attccggaggcaccactggactgcgcaattccagagcctgactcaccattgttgccagct
ccagaaccatttccagagccagagccagagcccgaaccgttaccagcacctgagccatta
cctgatcctgagccagagccattaccactaccagcaccggaaccagatcctgaaccgtta
ccagcacctgaaccagagcctgaaccgttaccagcacctgagccagagccagagccggaa
ccagaaccgttaccagcgcctgagccattacctgatcctgagccggaaccggaaccgtta
ccaacaccagaaccattacctgatcctgaaccagaaccattgccattaccggcacctgat
ccagagccattgccagagccgttgccagcacctgaaccagagcccgaaccgctaccagca
ccggaaccattacctgagccggaaccagaaccgttaccagcgcctgagccattacctgat
cctgagccggaaccagacccagatccgttaccagatcccgaaccaccgttaccagctcct
gaaccattacctgaaccagagccatttccgttaccgttaccattaccatttccgttacca
tttccaccattaggacagtctctgcagctcaaggtaggctcaccagaagcagtgttactg
gtttgcgaaccaccattgttagaacctgcagaggcagaagtggcgaatgttgaactagca
gctgctccattgccagatgtagttgaagacgaactcttggctccatttccaccagcagtc
gaagtaagaagcgtgcttgaagaagaggaagctgattcagacgcactagatccaccattg
ggacagtctctacagcccaaagtagggccagaagcagaggcagaggcggaagcagaacca
gtggcagaagcggaagcaccagcagaaacagaaccaccagcaaaaccagtggcagaggcg
gaggcagaagctgaagctgaagctgaagctgaagcagaaacagaagcagaagcagaagca
gaagcagaagcagaagcagaagcagaagcagaagcagaggcggaagcaccagcagaagct
gaagctgaggctgaggcaccagcagaagcggaactagagccaccatttggacaatctcta
caagctaaagtaggaccagcagaggatgattga
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