Sugiyamaella lignohabitans: AWJ20_1324
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Entry
AWJ20_1324 CDS
T05270
Symbol
FIP1
Name
(RefSeq) Fip1p
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
slb
Sugiyamaella lignohabitans
Pathway
slb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
AWJ20_1324 (FIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slb03019
]
AWJ20_1324 (FIP1)
Messenger RNA biogenesis [BR:
slb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
AWJ20_1324 (FIP1)
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Gene cluster
GFIT
Motif
Pfam:
Fip1
DUF3246
Agd3_CE
Myc_N
Motif
Other DBs
NCBI-GeneID:
30033114
NCBI-ProteinID:
XP_018735523
UniProt:
A0A167DLL1
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Position
A:complement(4128001..4128849)
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AA seq
282 aa
AA seq
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MSNIEDDDEFLYGSESPKPKRQKTTTQDASEDASISEALGLDSTATSGDATKAPPATNEV
AATDEGDEEEEEDDEEEDDDSDIEFVIDTKPGQKAEAPSRQVPYSTGKATAANDTAKEAA
TTGGKEIQRAEKPPGIDINAVAEHNGKPLTEVVIEDLEDKPWRRPGSDITDYFNYGFDEF
TWTAYCSKQDTLRANYTPQKVMAMMGMPVFPPEMMTFNQGFPGMPGMGAGGFPPPPAGFM
GMNNDDNGAYGGSNIVAGNNNGNNSGHGGHGSGGSGPGYRRK
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacattgaagatgacgacgagttcctatatggatctgaaagtcctaagccaaaa
cgtcagaagaccacaactcaagatgccagcgaggatgccagtataagcgaagctttagga
ttagattcgacagcgacatcgggagatgctactaaagctcctccagcaaccaatgaagta
gctgctacagatgaaggcgacgaggaagaagaagaggatgacgaggaagaggatgacgat
tcagatattgaatttgtaatcgacaccaaaccaggtcagaaggcagaggctccatcacgg
caagtgccatattccacgggaaaagccacagcagcaaacgatacagcaaaagaagccgcg
acaacaggcggcaaagaaattcagagagcagagaaaccaccaggtatagatatcaatgcg
gtggctgaacacaatggcaaaccattaacggaggttgtaatcgaagatttagaagacaaa
ccatggcgaaggccaggttcagatattaccgattatttcaactacgggttcgacgagttt
acatggacggcatactgttcgaaacaagatactctgcgagcaaactatacaccacaaaag
gtgatggccatgatgggcatgccagtattcccaccagagatgatgactttcaaccaagga
ttccccggcatgccaggcatgggagctggaggattcccgccaccacctgccggattcatg
ggcatgaataatgacgacaatggagcttatggtggtagcaatatcgtcgcaggaaataat
aacggcaataatagcggtcatggcggccacggtagcggaggctcaggtccaggctaccgt
cgaaaataa
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