KEGG   Sugiyamaella lignohabitans: AWJ20_1364
Entry
AWJ20_1364        CDS       T05270                                 
Symbol
TAF6
Name
(RefSeq) Taf6p
  KO
K03131  transcription initiation factor TFIID subunit 6
Organism
slb  Sugiyamaella lignohabitans
Pathway
slb03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:slb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    AWJ20_1364 (TAF6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:slb03021]
    AWJ20_1364 (TAF6)
   03036 Chromosome and associated proteins [BR:slb03036]
    AWJ20_1364 (TAF6)
Transcription machinery [BR:slb03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     AWJ20_1364 (TAF6)
   Coactivators
    SAGA/TFTC/STAGA complex
     AWJ20_1364 (TAF6)
Chromosome and associated proteins [BR:slb03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     AWJ20_1364 (TAF6)
    STAGA complex
     AWJ20_1364 (TAF6)
    TFTC complex
     AWJ20_1364 (TAF6)
    SAGA complex
     AWJ20_1364 (TAF6)
    SLIK complex
     AWJ20_1364 (TAF6)
SSDB
Motif
Pfam: TAF6_C TAF Histone TFIID-31kDa CBFD_NFYB_HMF Bromo_TP
Other DBs
NCBI-GeneID: 30033158
NCBI-ProteinID: XP_018735562
UniProt: A0A167DMW1
LinkDB
Position
A:complement(4229433..4230824)
AA seq 463 aa
MSAIKYSHTLWSPSDTVKDVAEILGIANLPDEVAKTLAMDIEYRIHEIVEQALKFMRHSK
RTTLTTSDIGYALRVLNVEPLYGYEAQRPLSYREAMVGPGQTLYYIDEDEEVDFEKIINQ
PLPKVPREVSFTAHWLAIEGVQPAIPQNPHMSEIKAMPAQIRGSQTGHSLAAMASDVEVK
PLVRHVISKELQLYFDRVIAAVLGTTSTGSASITSTTAANGPSPTDLRASALSSLRNDPG
LHQLVPYFVQFVQEKVSQNLKTNLDVLSSMLDIVHSLLSNPTIFIEPYIHHLMPSVLTPL
LAKQCGPKPITAESYQVRDYAASLLKLICDTYGDTYHTLKPRVTRTLLKGFMDTTRPACA
LYGSVVGLKALGAEIVRVVILGNIKAWYQGVFPRISKEEDRKTLLRGVIDALRSLKTEAP
QIPDETTIDEPALIAKLGEELATKISQEADGKEIAYAVLYGDI
NT seq 1392 nt   +upstreamnt  +downstreamnt
atgtcagctataaaatattcacatacattatggtcgccttcggacacggttaaagatgtg
gctgagattcttggaattgccaatttgcctgacgaggtggccaagacattggcgatggac
atcgaatatagaatccatgaaatcgtcgaacaagctttaaaatttatgagacattccaaa
agaactacacttacaacatcggatattggttatgctttaagagtactcaatgtagagcct
ctttatggttatgaagctcaacgaccactgtcatatcgtgaagccatggtgggccccggc
caaaccctttactatattgatgaagatgaggaagtggattttgaaaaaatcattaaccag
cctcttccaaaagtcccacgagaggtctctttcacagcgcactggctcgcgattgagggt
gttcagcctgctattccacaaaatccacacatgtcagaaattaaggctatgccagcacaa
atacgaggttctcagactggccattctttggccgctatggccagtgatgtcgaagtcaaa
cctttggttcgtcatgttatctcaaaagaattacaattgtactttgatcgtgtgatagcg
gctgtgttaggaacgacctcaaccgggagtgcgtccatcacttctacaacagcagcaaat
gggccatcacctacggatttacgcgcctctgcacttagtagtcttcgtaatgatcccgga
ctacatcagctggttccttattttgtccaatttgtacaggaaaaggtatctcaaaacctc
aaaacaaatctcgatgtactgtcgtccatgctggacattgtacattcgcttctttcgaat
cccactatatttattgaaccctacattcaccacctaatgccttctgttttaacaccactt
cttgcaaaacaatgtggacctaaacctattactgctgagagctaccaagttcgtgattac
gcggcgtcactactaaaattgatctgtgatacttatggcgatacttaccatactctcaag
ccacgagtgacccgcacactgctcaagggtttcatggacactactcgaccagcatgtgct
ctttatggatcagtagtaggactcaaagctcttggtgctgagattgtgcgcgtagtgatc
ctgggaaatattaaggcatggtatcaaggtgtatttcctcgaatctccaaagaagaagat
cgtaaaactctgcttcgaggtgttatagatgctctccgcagcctgaaaacagaagctcct
caaattccagacgaaaccactattgatgaacctgcacttattgctaaactcggagaagaa
ctggctacgaaaatttctcaagaggcggatggcaaagagattgcttatgctgtactgtac
ggtgatatatag

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