Sugiyamaella lignohabitans: AWJ20_1503
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Entry
AWJ20_1503 CDS
T05270
Symbol
MSH6
Name
(RefSeq) mismatch repair ATPase MSH6
KO
K08737
DNA mismatch repair protein MSH6
Organism
slb
Sugiyamaella lignohabitans
Pathway
slb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
AWJ20_1503 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slb03400
]
AWJ20_1503 (MSH6)
DNA repair and recombination proteins [BR:
slb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
AWJ20_1503 (MSH6)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
AAA_29
AAA_23
AAA_21
AAA_27
ABC_tran
AAA_22
Rrn6_HB
Motif
Other DBs
NCBI-GeneID:
30033313
NCBI-ProteinID:
XP_018735698
UniProt:
A0A167DRY8
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Position
A:complement(4677812..4680886)
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AA seq
1024 aa
AA seq
DB search
MDDFIVDDEDDEEDEKPKKKRKSNSSPPASSQASRTSTEPIVPSSPPAALSKFSAGSTYS
GSSKPALASSSPVRSSSPIKKPSFGSTKSFEKENEERYAWLVDIKDADGNREGDAEYDPR
TLYIPKSAWAKFTAFEKQYWEIKSKMWNTVVFFKKGKFYELYERDADIAHGEFDLKLAGG
GRANMRLAGIPEMSFDYWASAFIAKGHKVARVDQKETALAKEMNDRKSGKKEEKIIKREL
SYVLTAGTLTDEAMLVDEMSTFCMAVKQQDLHFATCFVDTATGAFYTTEFEDDVDFSQFE
TLIAQIRPRELILEKGCIASRAVKILKNNTSVDTLWNFLKSGSEYWDYDTSYEELLNSRF
FKGEDADDLSNYPIAMRDISKNKPLSMSAFGGLMWYLRSLKLDDSLISLGNFNYYETIQK
GSSVVLDGQSLQNLEVFANTFDGGAEGTLFRLLNRCITPFGKRKLKGWVSHPLMDPIKIN
ARLDTVEFLNNNPDVQEFIESKLISLPDLERLLSRIHAGHLKPKEFVRVIESFELVYKLM
AGLNQKFSDSSTDPLLKELFESMPNLENLLPQWTDAFDRQKAQYDNVLVPEPGIEEEFDN
TKNKIDGIEKELEGWLKKYKREYGSVGICYRDSGKEIYLIEVPVKVKNIPKDWQQMGATG
KVKRYWSPEVRSLVRELQEARELHKVAVDGVQAKFYQRFDNDYLQWLKAVQILGSVDCLI
SLAKTSSSLGSPSCRPQFVESDRGVLDFKELRHPCFMSASSDFIPNDVSLGGENANITLL
TGANAAGKSTVLRMTCTAVIMAQIGCYVPAESARLTPVDRIMTRLGANDNIFAGKSTFYV
ELSETKRILSEATNKSLIVLDELGRGGSSSDGFAIAEAVLHHLATHVGSLGFFATHYGTL
NNSFANHPQVNAKRMAILVDESSRKVTFLYKLEDGVSPGSFGMHVASMCGIDKSIVDRAE
EAARNFEHTARMKKMLASTSGDDSTVLPLGIQSDFVWALNGDAPASKPETGFALENMLKM
IKSL
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atggatgacttcattgtagacgatgaagatgatgaggaagacgaaaagccaaaaaagaaa
cgcaaatcaaatagtagtcctcctgcttcttcgcaagcatcgcggacttcaaccgagccc
attgttccttcatctcctccagcagctctcagcaagttctcagctggttcaacatattcc
ggatcatcaaagccagcattggctagctcttcaccagtcagatcctcctcaccgattaag
aaaccgtcgtttggcagtacaaagtcgtttgaaaaggaaaatgaggaacgatatgcatgg
ctagttgatataaaagatgctgatggaaaccgcgaaggagatgctgagtacgatcctaga
actttatacattcccaaatccgcatgggcaaagtttacagcatttgaaaaacaatactgg
gaaatcaaaagcaagatgtggaacactgttgtatttttcaaaaaaggtaaattctacgaa
ctctatgaaagagatgccgatattgctcacggtgagtttgatctgaaattggccggtggt
ggtcgagccaatatgagattggcaggtattcctgaaatgtcatttgattactgggcgtcc
gcatttattgccaagggtcataaggtagccagagtcgatcagaaagagacggccttggcc
aaggaaatgaatgaccgtaaatctggcaaaaaggaagagaagattatcaagcgagagctc
tcatatgttcttactgcgggaactttgactgatgaagctatgttagttgacgaaatgtcc
accttttgtatggctgtcaagcaacaggatttacattttgcaacttgttttgtagatacc
gccactggtgcattttatactactgaatttgaggacgatgtggatttttcgcagtttgaa
acactgatcgcccagatccgacccagagaattgatcctagaaaagggatgtattgcttca
agagcagttaaaattttgaagaacaatacttctgtcgataccttgtggaatttcttgaag
tctggcagtgagtactgggattacgacacctcatatgaagaattgcttaactcccgcttc
tttaaaggagaggatgcagatgatttatcaaactatcctattgccatgagagatatttcc
aagaacaagccactttcaatgtctgctttcggaggactgatgtggtatctcagatcactg
aagttggacgacagtcttatttctttgggtaatttcaactactatgagaccattcagaag
ggatcaagtgttgtattggatggtcagtctttgcagaacttggaggtatttgccaatact
tttgatggtggtgctgaaggtacacttttcagattgttgaacagatgtatcacaccattt
ggtaagcgaaagctcaaaggatgggttagtcatccattgatggacccaattaaaatcaat
gccagactcgacacagttgaattcttgaacaacaaccctgatgttcaagagtttattgag
tctaagcttatctcacttcctgatcttgagagattgctgtcacgaatccatgctggtcat
ttgaaaccaaaggagtttgtgagagtgattgaaagttttgagcttgtttataagcttatg
gcaggattgaaccaaaagttctctgattcatcgactgatcctcttcttaaagagcttttc
gaaagtatgcctaatttagagaatctgctgccccaatggacagacgcattcgaccgtcaa
aaagcacaatacgataatgttttagttcctgaaccaggtatcgaggaagagtttgataac
acgaagaacaagatcgatggtattgaaaaggagcttgaaggttggttgaagaagtacaag
cgtgaatatggatcagtgggaatctgttaccgcgatagtggcaaggaaatctacctgatt
gaagttcccgtcaaagtgaaaaacattcctaaagattggcaacagatgggtgccactggt
aaagtaaagcgatactggtcacccgaagtgcgaagtctggtaagggagttgcaagaagca
cgcgagctacacaaggttgctgtcgatggagtacaagcaaagttttaccagcgtttcgat
aacgattacttgcaatggctgaaagcagtccaaattctgggaagtgtcgactgtttgatc
agtttggctaaaacctcaagctcattgggatcgcctagttgcaggcctcagtttgtggag
agcgacagaggtgttcttgatttcaaagaacttagacatccttgtttcatgtcagcaagt
agcgattttattcccaacgatgtttccctaggtggtgaaaacgccaatatcactctgttg
acaggagctaatgctgctggaaagtctacagttctgagaatgacatgtacagctgttatc
atggcccaaattgggtgttatgttccagctgaaagtgcacgtctcacccccgttgaccgt
atcatgacgagattgggcgccaacgacaatatctttgctggcaaatcgaccttttatgtt
gagctttcagaaacgaagagaattctcagcgaagctaccaataagtcgctcattgtgctt
gatgagcttggtagaggtggtagtagctcggatggatttgcgattgcagaagcagttttg
catcacctggctacacacgtcggtagtttgggctttttcgcaacacactatggcactctc
aacaacagtttcgccaaccatccacaagtcaacgccaagagaatggctattctagtggac
gaaagcagccgcaaggtgactttcctatacaaactcgaagatggggtatctcctggatca
ttcggtatgcatgttgcttccatgtgtggaatcgataaatctattgttgaccgcgctgaa
gaggcagcaagaaatttcgagcatactgctagaatgaagaagatgctggcatcgacatct
ggagatgattcgaccgtgcttcctctgggtattcaaagtgattttgtgtgggcattaaat
ggcgatgctccagccagtaagcctgagactggctttgcacttgaaaatatgctcaagatg
atcaaatctttgtaa
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integrated database retrieval system
