Sugiyamaella lignohabitans: AWJ20_1611
Help
Entry
AWJ20_1611 CDS
T05270
Symbol
NAN1
Name
(RefSeq) Nan1p
KO
K14552
NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
slb
Sugiyamaella lignohabitans
Pathway
slb03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
AWJ20_1611 (NAN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slb03009
]
AWJ20_1611 (NAN1)
Ribosome biogenesis [BR:
slb03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
AWJ20_1611 (NAN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR75_1st
Beta-prop_WDR75_2nd
Beta-prop_EML_2
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
VID27
Beta-prop_EML
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
30033433
NCBI-ProteinID:
XP_018735802
UniProt:
A0A167DV21
LinkDB
All DBs
Position
A:4947140..4949533
Genome browser
AA seq
797 aa
AA seq
DB search
MSEDPSRRKKAVGPTYTSSRAWKVTSTVGGRFPNINPIFTPDKNHFIVLTSLELRVYSKT
TKQIVRSIPVDQINEVTDLQLCEQSTSFVVIARSTGKYELVNWLDKNAEKIVIDVKFPIH
KIISRSDSELVIYSEKHGIVSLTKNVESGEWEGLTPIIQIKGAKTFAISASKKYIAFYSS
TKSGETISVGKLDKSYKLVSEKVIKRTRAISSIAISDKGILAVGSVTGVIDLYYDIFGTS
GEPLVRALKWHVDSVLSLSFSLNDDYLLSGGKERVLVFWQLETDNTQFLPRLEGDITDIY
VDPNSQLYALSLQGDQLVILSSIDLASRFQVSGIKAVFSKVPGDPEKERKRRRNKDWDQI
NVADYTTAYYINPQTKHAYFPTRNGSQIQVYDTTRDQQLTVFSAASAIQTGKVRSESVIE
DPIVTHVVFTADGNWMATIDVRTSPVIDRLLSKDDKEINLKFWSRNQKSNEVRWDLATRV
SAPHGLNKSIVDIIPTISGHGFITAAQDGGIRLWKPANVDEIASTARTVTWGVRRFLPPT
AMTSTAVSVSSSSDGSVLVLGYESTLRLIDGVNFRAIRTLPNILGSRVRHVQIVGSKLVA
LSKTRLVVWDLLTNRQVWSIQVHSTTHGKRLLAIDTINETVALAVNFFARDFKVVSRLFI
FRLDTPMPIHIESHPYAISALNHLTGTGNFSFMNVNGCISQLSSGTKAGLHRAGLAVIGS
ANSEENDFNSGLKSLYEAQKREAKIANPAGDDLNTTIHDQVLSIHSFDRVFDDALHITSL
ESLMEGVLSITSPRLLD
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaagatccgagtcgacggaaaaaggcagttggacctacttatactagctctagg
gcatggaaagtaacttctactgttggtggtagattccccaatatcaatccaatcttcact
cccgacaagaatcattttatagtgctcacgtccttggaattaagagtgtactctaaaact
acaaaacaaattgttcgaagcatccccgtggatcagataaatgaagttacagacttacaa
ttatgtgagcagagtacgtcgtttgtggtcatcgccagatccaccggcaagtatgaactt
gtcaactggctagacaaaaatgcagagaagatagttattgacgtcaaattccctattcac
aagattatttcaagatccgactcggagctagtgatttatagtgaaaagcacggcattgta
tcattaacaaaaaatgtcgaatccggcgaatgggaaggcctaactccaatcattcagatt
aaaggagcaaagacatttgcgatttctgcttcgaagaaatacatcgcgttctactcctct
acgaaatctggcgagactataagtgttggaaaacttgataaatcttataaattggtctct
gaaaaggtgatcaaaagaaccagggctatatcttcgattgctatctccgataagggcatt
ttagctgtcggatcagtgacgggtgttattgatctgtactatgacatctttggtacatct
ggggagcccctagttcgagctcttaagtggcatgtcgactcagttctatcgctgtcattt
tctcttaatgatgattatttattatcgggtggtaaggaacgtgtacttgtattctggcaa
ttggaaacagacaacactcaattcttaccccgtttagagggagacattactgacatttac
gtggatcctaattcccagttatacgcgttgtctctgcagggcgatcaacttgtcatttta
tcatctattgaccttgccagtcgtttccaagtatctggaattaaagctgttttcagcaag
gtaccaggtgatcccgaaaaagaaagaaaaaggcgaagaaataaggactgggatcaaatt
aatgttgctgattatactacagcctattacattaaccctcaaactaagcatgcttacttc
cctactagaaacggatcccagattcaagtgtacgatacaacccgtgaccagcagctaact
gtcttttctgctgcctcagccatccaaacgggtaaggtgcgtagtgagagcgtaatcgag
gaccccattgtcacacatgtagtatttactgccgacggtaactggatggctacgattgat
gtacgcacatcaccagttatcgacaggctactttccaaagatgacaaagaaatcaacttg
aaattttggagtagaaatcaaaagagtaacgaagtgcgatgggatttagcaaccagggta
tctgctccacatggtctcaataagagtattgttgacatcattcctaccatttccggccac
gggtttatcacagcagctcaagatggtggcattagattatggaagccagcaaatgttgat
gagattgcttccacagctagaaccgtgacttggggagttcgtagatttttacctccaact
gctatgacttctactgcagtttctgtatcatcatcaagtgatggcagtgtgcttgttctc
ggttacgaatcaactctgagattgattgatggtgtcaatttcagggccattcgcactctc
cctaatattttgggctcaagagttcgacatgtgcaaatcgtgggctcaaagcttgtcgcc
ctatcaaagacaagattagtagtatgggatcttttaaccaacagacaagtgtggtctatt
caggttcattccactactcatggcaaacgattactggctattgataccatcaacgagact
gttgcactggctgtaaatttttttgccagagactttaaggtcgtttcaagattatttata
ttccgcctggatacccccatgcccattcatattgaaagtcatccatatgccattagtgcg
ctgaaccatcttacaggaactggtaacttcagcttcatgaatgttaacggttgcatcagc
caattgagttcaggaacgaaagctggtcttcatagggccggccttgccgtcattggctct
gcaaatagcgaagagaacgatttcaatagtggtctcaaatccttatatgaagctcaaaag
agggaggccaaaattgcaaatcccgctggagatgaccttaacacaacaattcatgatcaa
gtgcttagtatccactcttttgatagagtgtttgacgatgctctccacatcactagtctg
gaaagtcttatggagggcgttctatctattacaagtcctaggctacttgactaa
DBGET
integrated database retrieval system