Sugiyamaella lignohabitans: AWJ20_163
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Entry
AWJ20_163 CDS
T05270
Symbol
RAD54
Name
(RefSeq) DNA-dependent ATPase RAD54
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
slb
Sugiyamaella lignohabitans
Pathway
slb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AWJ20_163 (RAD54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slb03400
]
AWJ20_163 (RAD54)
DNA repair and recombination proteins [BR:
slb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
AWJ20_163 (RAD54)
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
SNF2-rel_dom
Rad54_N
Helicase_C
ResIII
HDA2-3
CDC45
Motif
Other DBs
NCBI-GeneID:
30033453
NCBI-ProteinID:
XP_018734413
UniProt:
A0A167CNW1
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Position
A:512409..515585
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AA seq
1058 aa
AA seq
DB search
MMAEVRPRTTTRKRLPRLTSSGGSDLVVIPYDQHEEPTPILQNTINECILPDNGGIIDGY
EPIYLDNETDVNLIDGLMVVPDHATGIDGLPITPIDTSPSHTDVMSIGAVLSNSQPTELS
LDNGDTLGEIEEVSTPVAEKSQPKSRKESKSKADSQKKSKSSQGSSQNMNQAKSRSQKRS
QSQNQIVENIALEEEENEVKEAEKTEENQEVIKKPKSLPRRPRPFDLASPCTPIHSSAIR
RPQSAQNSPLGINKRLKTDPLSTITKPFRVPTKSAINANRPFSRRDDLSRSASRKIKSYA
EIENIETEQFNKEIEQPASPYTPGGGIKRLGTKVDPALKNSIDASDMILGRRFITPLKEK
PLNMGPSAALGMKRRHEFVPRPLHDPSGEFAIVLFDPTIDDEPVEEIDPNKIVEGSEDEN
LGETEVTPVAPTTPSKPSLADILGLSNEKKKVYPKVPVVIDPRLAKILRPHQVEGVKFLY
KCVTGRVQKDANGCIMADEMGLGKTLQCITLMWTLLKQSPEGNGGTISKCIVVCPSSLVR
NWANELVKWLGEGAITPLAADGKSVKNADLSAALRQWSTASGRQIVRPVLIISYETLRRH
CDDLRNTEIGLLLADEGHRLKNGESLTFTALDALNVQRRVILSGTPIQNDLSEYFSLLSF
ANPGLLGTRLEFRKNYENAILKGRDSFATEEEVTDGETKLKELSLLVSRFIIRRTNDILS
KYLPVKYEHVVFCNMTEFQINLYNKFIASPDVKKVIKGSKNNPLKSIGILKKLCNHPDLL
DLSRDIQGAEDVLPSDYVHPSHRGGRDRGVRTLYSGKFMVLERMLARIRYETNDKIVIIS
NYTQTLDLIEAMCRESRYGAFRLDGKMAISKRQKLVDKFNDPEGSEFVFLLSSKAGGCGI
NLIGANRLILMDPDWNPAADQQALARVWRDGQKKDCFVYRFISTGSIEEKIFQRQSMKQS
LSSCVVDEAEDVERLFSFNDLKKLFSFDGHTLSDTHDTFKCKRCKDNRQVAKAPAMLYGD
ATTWNHFTKPELENIQDLLLRQELTEEIVSFVFQYISH
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgatggcagaagttagaccccgaacaacgacaagaaaaaggctgcctcgattaacctcg
agcggagggtcggaccttgtggtcattccatacgaccagcatgaagaaccaactccaata
cttcaaaatactatcaatgaatgtattctgcccgataatggtggtattatagatggatat
gaacctatttatcttgataacgagacggatgtgaatttaatagatggactaatggtcgta
ccagaccatgcaacgggtattgatgggttacctataacgcctatcgacacgtctccttct
catacagatgttatgtccattggagctgtactttctaattcacagcctacggagttgagt
cttgataatggtgatactctgggggaaatcgaggaagtcagcacacctgttgctgagaaa
agtcagcctaaatcacgtaaggagagcaagtccaaagccgactctcagaagaagagcaaa
tcaagccaaggaagttctcaaaatatgaaccaagccaagtctcgaagccagaaacgaagt
caaagtcagaaccaaatcgtcgagaatattgctctagaggaagaggaaaatgaggtcaag
gaagcagagaaaacagaagaaaatcaggaagttataaagaaacccaaatcgttaccacgt
cgtccacgaccctttgatcttgcttctccatgtacacctattcactcttcagcaattaga
cgaccccagtctgctcagaattctcctctgggaatcaataaacgtctaaaaaccgacccg
ctgtcaacgattacaaaaccattcagagtgcccactaaaagtgctattaatgccaaccgt
ccattttcacgtagagatgatttgtctcgaagtgcatctcgaaaaattaagagctatgct
gagatcgaaaatatagagactgagcaattcaataaagaaattgagcaacctgcttcccct
tatactccaggaggcggtattaaaagattaggtacgaaagtggatccagcacttaagaat
tcgattgatgcttcagacatgattcttggtcggaggtttatcacgccattaaaggagaag
ccgcttaacatgggaccatctgctgcgctaggtatgaagcgacgacatgagtttgtgcct
cgaccacttcatgatcccagtggtgagtttgctattgttctttttgaccctactattgac
gacgagcctgttgaagagattgacccaaataagattgttgaaggcagcgaagatgagaat
ctcggcgaaactgaagtaacacctgtggcacccacgactccttctaagcccagtcttgct
gatattttaggactgtccaatgagaagaaaaaagtctaccccaaggtaccagttgttatt
gatcctagactggccaagattttacgtcctcatcaagttgaaggtgttaaattcctgtat
aaatgcgttactggacgagtacagaaggatgctaatggatgcattatggcagatgaaatg
ggtcttggtaaaacgcttcagtgcattacattaatgtggactcttctcaagcagtcacct
gagggaaatggaggcaccatcagtaaatgtattgttgtgtgtccttcaagtttagtccga
aattgggcgaatgagcttgtgaagtggttaggagaaggtgctataactcccttggcggct
gatggcaagagcgtaaaaaatgccgatctcagtgctgctttacgtcaatggagtacagcc
agtggacggcaaattgttcgaccagttctaatcatctcctatgagactcttagacgtcat
tgtgatgatcttcgtaatactgagattggacttcttttagccgatgagggacatcgtctg
aagaatggcgaatctttgacattcacagcccttgatgcacttaacgttcaacgaagagtc
attctgtctggtactcccattcaaaatgatctttcggaatatttctctctcctatcgttt
gctaatcctggactcctgggaacaaggctcgagttccgtaagaattatgaaaatgccatt
cttaagggtcgtgactcgtttgctacggaagaagaagtgacagatggtgaaaccaaactc
aaagaactctctctactggtcagcagatttatcatccgccgaacgaacgatatattgtcc
aagtatcttcctgtgaagtatgagcatgttgtattctgcaacatgaccgagttccaaatt
aatctctacaacaaattcatcgcctcccccgacgtgaaaaaggtaatcaagggaagcaaa
aacaatcctttaaagtccatcggtatcctcaagaagctatgtaaccacccagatcttctc
gacttgtcaagagacatacaaggagctgaggacgttctgccatccgattatgttcatcca
agtcaccgtggaggtcgtgatcggggtgttcggacattgtattcaggtaaatttatggtt
ttggaaaggatgctcgcgcgtattcgttacgagacgaatgacaaaattgtcatcatcagt
aactacacacaaactttggatcttattgaggcaatgtgtagagaatcaagatatggcgca
ttccgactcgatggtaaaatggcaatcagtaaacgtcaaaagttggttgataagtttaac
gaccctgaaggaagtgagtttgtctttcttcttagtagtaaggccggtggatgtggtatc
aatctgattggcgccaatcgtctcattcttatggatcccgattggaatcctgcggcagac
cagcaagccctagcaagagtatggcgtgatggccagaaaaaggactgttttgtctaccgg
tttatctctacagggtctattgaggagaagatttttcagcgacagtctatgaagcagtct
ttatcatcatgtgtagtcgacgaggctgaggacgtcgagcgtcttttctcttttaatgat
ttgaagaagcttttctcttttgacggtcatacactgtcagacacccatgacacttttaaa
tgtaaacgatgcaaagacaaccgtcaagtcgccaaagccccagcaatgctgtacggagat
gccacgacctggaatcatttcaccaaaccagagttggaaaacatccaagatctgttgctg
agacaagaattaacagaagaaatcgtcagttttgtgttccagtacatttctcactaa
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