Sugiyamaella lignohabitans: AWJ20_1751
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Entry
AWJ20_1751 CDS
T05270
Symbol
RNA1
Name
(RefSeq) Rna1p
KO
K14319
Ran GTPase-activating protein 1
Organism
slb
Sugiyamaella lignohabitans
Pathway
slb03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
AWJ20_1751 (RNA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slb03019
]
AWJ20_1751 (RNA1)
Messenger RNA biogenesis [BR:
slb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
AWJ20_1751 (RNA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_8
LRR_14
DUF604
Motif
Other DBs
NCBI-GeneID:
30033588
NCBI-ProteinID:
XP_018735937
UniProt:
A0A167DYZ7
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All DBs
Position
A:complement(5328648..5329835)
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AA seq
395 aa
AA seq
DB search
MSSFSIEVQGKKFDTEADIRPYLEKLDQLENIREVNFTGNSYGKGACEALAKSLASKKDL
EVANLSDIFTGRIRSEIPDSLDDILVALLNCPKLHTIDLSDNAFGIATIDPLESFLAKHS
PLEHLLLSNNGFGPLAGSRVANALEKLAEVKKANGSPTLKTVLCGRNRLENGSMEAWASF
LAAHGSIQEIRLYQNGIRQEGLEHLFLNGLAKSPELEKLDLQDNTLTERGARALSKVFHN
WKKLKELGISDCLLSARGGEIFAQTIVDGEELPNLEILKLQYNEIESNGINLLSEAIAKK
LPNLKTLEINGNRFSEDHEAVDSITKIFEDRGFGEIDELDDMEELTDDEDEEEDENESGF
EDIVKDAEEEEEENVAPEKSDEVDDLAAKIEKTTI
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgttttctattgaagttcaagggaagaagtttgatactgaggcagatatcaga
ccctatttggagaagctggatcagcttgaaaatatcagggaagtaaattttactggtaac
tcttatggtaaaggagcttgtgaagccctcgctaagagccttgcatccaaaaaagacctg
gaggtcgctaatttatctgatatttttactggtagaatccgaagtgaaatccctgattcc
ctggatgatatccttgttgcattgttgaactgcccaaagttacataccattgatctctcc
gataacgcatttggcattgccactatcgatcctttggaatcattcttagctaaacacagt
cctttggagcatttacttttatcgaataatggatttggcccattggctggatctagagtc
gccaatgcattggaaaagcttgctgaggtgaaaaaagccaacggcagccctaccctgaag
actgttttgtgtggtcgtaaccgtttggaaaacggttctatggaggcttgggcatcattc
ctagctgcacatggatctatccaagaaatacgattatatcagaatggtattcgtcaggaa
ggtttagagcatttgtttttgaatggactcgctaagtctccagaattagaaaagctcgat
ctacaggataacactttgactgaaagaggcgctcgtgcacttagtaaagttttccacaat
tggaaaaaactcaaagagttaggtattagcgactgtttactgtcagctcgtggcggtgaa
atttttgctcagaccatcgttgatggcgaagagctccccaatttagagattttgaaactc
caatacaatgaaatcgaatccaatggtattaatttgctcagtgaagcaattgccaagaag
ttgcccaatctgaagactcttgaaattaatggtaacagattttctgaggatcatgaggct
gttgatagcatcactaaaatttttgaagaccgtggatttggtgaaattgatgagttggac
gacatggaagagcttacagatgatgaagatgaggaagaagatgagaatgagagtggtttc
gaggatattgtcaaggatgcagaagaagaagaggaagaaaacgttgcccctgaaaagagc
gacgaagtcgatgaccttgccgccaagatcgaaaagacgactatctaa
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