Sugiyamaella lignohabitans: AWJ20_1818
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Entry
AWJ20_1818 CDS
T05270
Symbol
MRE11
Name
(RefSeq) MRX complex nuclease subunit
KO
K10865
double-strand break repair protein MRE11
Organism
slb
Sugiyamaella lignohabitans
Pathway
slb03440
Homologous recombination
slb03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AWJ20_1818 (MRE11)
03450 Non-homologous end-joining
AWJ20_1818 (MRE11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slb03032
]
AWJ20_1818 (MRE11)
03400 DNA repair and recombination proteins [BR:
slb03400
]
AWJ20_1818 (MRE11)
DNA replication proteins [BR:
slb03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
AWJ20_1818 (MRE11)
DNA repair and recombination proteins [BR:
slb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
AWJ20_1818 (MRE11)
BRCA1-C complex
AWJ20_1818 (MRE11)
NHEJ (non-homologous end-joining)
MRX complex
AWJ20_1818 (MRE11)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mre11_DNA_bind
DUF3080
Motif
Other DBs
NCBI-GeneID:
30033662
NCBI-ProteinID:
XP_018736000
UniProt:
A0A167E121
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Position
A:complement(5504112..5505935)
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AA seq
607 aa
AA seq
DB search
MDVLSATGFLNYYGRVTDSRNIEVKPVMFRKGNTKLALYGISNLRDERMKHTFKHGRAKF
LRPSVQTNEFFNLLAVHQNHHAHTKRGVFPEEYIPDYIDAVVWGHEHECLIDPKINVRKG
FSVIQPGSSVATSLIEGEAVPKHVAIMSVTGKTFTMENIRLKTVRPFAIETVELSRSPIK
PGVDNRTQVTRWLEKRVKDLIQRAVNEWEEVNRTPGFDNNGEDKTGCPLPLIRLKVEYSG
DYQVENPTRFSNRFVGQVANVDDVIHYFRRKVSSSNGKGQNISRTDITINKTKDENGLEM
IQVEELIEEFLKTDEMSLLHGRALSTAINNLVTKEDKAAIKQFFEKSLEVQSKVLVGMGV
EDVQSIIAALEKTKINTQESLKEIADEQTPSSTARYHSSDSLEPESLRTGSKAKTDLATE
STQRQRAVPVKTTGRGRNTRTKVSTNYEDDENDDDLDEGNILPKTSRLSTRTRKPTSQPV
IRVVSDSDEPLDIDDDKDDDEEGEEEEEDPEVIISDYDEPAPTPPPRRTTGRSTRARPGL
SAARRQAPKSSTTSNQVISRPPQVRKPTPIQAERPSQRASSRMAAAAVSSCVSPYHSQML
PLTRFLE
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggatgttttgtcggctactggattcttaaactattatggaagagtgactgacagtcgg
aacatagaggtcaagccagtaatgttcagaaaggggaacactaagctggcgttatacggt
atatccaatttgcgagatgaaaggatgaagcatactttcaagcatggaagagcaaaattt
ttgagaccaagtgtccaaacaaatgagtttttcaatcttcttgcagtccaccaaaaccac
catgctcacaccaagcggggtgtctttccagaggagtatattccagattacattgatgca
gtagtttggggccatgagcatgagtgtctcattgaccccaagataaatgtgcgtaaaggt
ttcagcgttattcagccaggaagttcagtagctaccagtttgattgaaggtgaagcggtg
cctaagcatgtagctattatgtcagtcacagggaaaacgtttaccatggagaatattaga
ctgaagacagtgaggccctttgcgattgaaacggttgaactttctcggagccctattaag
cctggagttgataataggacacaggtcactagatggctcgagaaaagggtcaaagacctg
atccaacgagcagtaaacgagtgggaagaagttaatagaactccaggttttgataacaat
ggagaagataaaactggatgtcccttgccactgatccggctcaaagttgaatattcaggt
gattatcaagttgagaacccaacaagattttccaatagatttgtcggtcaagttgccaat
gttgatgacgtaatccattactttcgacgtaaagtttctagcagcaatggaaagggacaa
aatatttcaagaacagatattactattaacaaaactaaagacgaaaatgggcttgaaatg
attcaagtggaagagttgatagaggagtttcttaaaacagatgagatgagccttttacat
ggcagagcgctgtcaactgcaataaataatctcgtcaccaaagaagataaggcagcaata
aaacaatttttcgagaaatctttggaagttcagtccaaagtgcttgttggaatgggcgtc
gaggatgttcaatcgatcatagctgcccttgaaaagaccaaaattaatactcaagaaagc
ttaaaagagattgcagatgagcaaaccccttcgagtaccgcaaggtaccattcatcagac
agcctggaaccagagtcacttcgaacaggatccaaggcaaaaactgatcttgccaccgaa
tctacacaaagacaaagggccgtgccagtaaaaacgactgggagaggaaggaatacccgt
acaaaggtgtcaacaaactacgaggatgatgaaaatgatgatgaccttgatgaaggaaat
attttgccgaagactagtcgactatcgactcgaactcggaagcctacctcacagccagtc
ataagggttgtctcggattcagacgaaccactggacatagatgacgacaaggatgatgat
gaagaaggagaagaagaagaagaagatcctgaggtcataatttccgattacgatgagcca
gcgccaacgccaccgccgcgtaggacgacgggtcgtagtaccagagctcgtcctggtctc
tcagcagcaaggcgacaagcgccgaaatccagcaccactagtaatcaggttatttcccga
ccgccacaagtcagaaaaccaacaccaatacaggctgaaagaccgtcgcagcgagccagt
tctaggatggcagcagcagctgtaagtagttgtgtttcaccttatcattctcaaatgtta
cctctaacacgctttttagaataa
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