Sugiyamaella lignohabitans: AWJ20_2046
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Entry
AWJ20_2046 CDS
T05270
Symbol
RTR1
Name
(RefSeq) Rtr1p
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
slb
Sugiyamaella lignohabitans
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
slb01009
]
AWJ20_2046 (RTR1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slb03021
]
AWJ20_2046 (RTR1)
Enzymes [BR:
slb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
AWJ20_2046 (RTR1)
Protein phosphatases and associated proteins [BR:
slb01009
]
HAD phosphatases
Fcp/Scp phosphatases
AWJ20_2046 (RTR1)
Transcription machinery [BR:
slb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
AWJ20_2046 (RTR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
CheR
Motif
Other DBs
NCBI-GeneID:
30033914
NCBI-ProteinID:
XP_018736933
UniProt:
A0A167EU39
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All DBs
Position
B:234659..235537
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AA seq
292 aa
AA seq
DB search
MSDTIFSMDTGDSTAHPKFATQQDAVINGVTHNVSANNSPSQSLIEMCRIIAKYSKPGFL
SAGEASQILLSIVELMSDGVESDALKFSSRFLTGSDYEDIVVERNILHRCGYPICDKDPK
GIHKAHQINYRTPKMILPSTYLSKYCTKEHYQASTFFASQLSDASLFSRKDVTLLPYGAS
TEYELQIALMEEVQVLSQSQNRSMQDIIQELKSLSLSKQQSQIDTLPSTQPRRYSSANPA
DPHLVDLSDQIKAFKIVERDPSIPTLDAGDEPIEEAIASGVEGYNSRFGRSV
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatactatattctctatggatactggagattcaacagctcaccccaaatttgca
acccagcaagacgcagtaatcaacggtgtcacccataatgtttcagccaataatagtcct
tcacaatctctaatagagatgtgcaggatcatagccaaatactctaaaccaggatttctc
tcagctggtgaggcttcacaaatactactttcaattgtggaattgatgtctgatggtgtt
gaaagtgatgctttaaagttctctagcaggtttctgactggttctgactacgaagatatt
gttgttgagaggaatattcttcaccgatgtgggtatccaatttgcgataaagatcctaaa
ggtattcacaaagcacatcagatcaattatagaacaccgaagatgatcttgccatctact
tacctatccaaatactgtaccaaagagcattatcaggcatcgactttttttgcttcccaa
ttgtcagatgcgtccctcttttctcgtaaggatgtcacgttactaccttacggtgcatca
actgaatatgaacttcagattgctttaatggaggaggtgcaagtattatcacagagccag
aatcgatcaatgcaagatattattcaggaattgaaatcattgtcattgagtaaacaacag
tcacaaatagatacattgccgtcaacacaaccgcgaagatactcgtcggcgaaccctgct
gatccacatctggttgatttaagtgaccaaatcaaagcattcaagatcgttgaaagagat
ccatctattcctaccttagatgctggtgatgagccaatagaagaggctattgcttctggt
gtggaaggatataattcgcggtttggacgaagtgtatga
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