Sugiyamaella lignohabitans: AWJ20_2085
Help
Entry
AWJ20_2085 CDS
T05270
Symbol
VPS13
Name
(RefSeq) membrane morphogenesis protein VPS13
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
slb
Sugiyamaella lignohabitans
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
slb04131
]
AWJ20_2085 (VPS13)
Membrane trafficking [BR:
slb04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
AWJ20_2085 (VPS13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS13_VAB
VPS13_C
Motif
Other DBs
NCBI-GeneID:
30033957
NCBI-ProteinID:
XP_018736969
UniProt:
A0A167EUY0
LinkDB
All DBs
Position
B:complement(336117..338450)
Genome browser
AA seq
777 aa
AA seq
DB search
MLPNRKAQWSAPFNITNTGRTYVKVFVHGKGTVLLKIDVLLENSTLFLYFDEAGNNWPYS
IRNFSKFEFLFYQANPYVDDQGVEQHPHPPFNPIRYKLPPKSLMSYAWDFPAAPFKELVI
LCNGKERRVQLTEIGNLRPMKLPRTERSEGGIIELHVVADGPLQSLVLSDYDASSSIYKI
KSQSQASSVSQQASSSQVDLFSVDDSVDNDSVLTVTVQLEGVGVSLINRRHVELCYMTTR
GFEFKYKSSELYETFSMKVKWIQIDNQLYGGHYDVILFPSVLPKSTREMENHPTFSAMVT
RVKDDSHGVLYIKYASVLLQQMTLEMDEDFLFSLLDFARDPNTPWTGSEKDILCDESSHI
PEPEKESSGEEIYIEVLHIHPAQMDLSFVRTERINVEDRSSSPTALNYFVNILTMAIGNI
NDAPVKLNALLMENVRTQMPVLIQSVESHYSQGFLYQVHKILGSADFIGNPVGLFNNISS
GFVDMFYEPYNGFMLNDRLDEFGIGLAKGGFSFMKKSIFGISDSVYKVTGSISKGLSVAT
LDREFQSRRRINMARNRPRHALYGLTQGATSFFDSVTSGVSGLALAPMEGAAKEGASGFF
KGLGKGIVGLPTKTAIGFFDLASNLSEGVRNTTTVFDGETITRIRPARFIAQDGIVRPYS
QREAVGQQWLKSANSGRYFKDEYLAHINMTQNAAVVIVTTTRIITLFTSNLRTDWEVRFD
ELRSINRKSTGLTLILRPDDERREFFIPIGDQDSQRFLFKEISTAVKEYNRRLQTIS
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgcttccaaataggaaagcacagtggtcagcacccttcaacatcacaaacactggacgc
acttatgtcaaggtttttgtccatggtaaaggtacagtgcttttgaaaatcgatgttttg
cttgaaaattcgactttgtttttgtactttgacgaggcaggaaacaactggccctactct
attcgcaacttctccaaatttgagtttttgttttaccaagccaacccatatgttgatgac
caaggagtggagcagcatccacacccaccattcaaccctattcgatacaaacttccacca
aagagcttgatgtcatatgcatgggattttccagctgcccccttcaaagagctggttatt
ctttgtaatggcaaggagagaagagttcagttaactgaaattggtaaccttcgacccatg
aaattgcctagaactgagaggtcagagggcggtattattgaactccatgttgtagctgat
ggtcccttgcagtcgttggtattgtctgattatgatgccagttcaagcatatacaagatc
aagtcacagtcacaggcatcgtcggtatcgcaacaggcgtcttcatcacaagtcgattta
ttcagtgtagatgattctgttgataacgactcggtattgacagttactgttcagcttgaa
ggtgtaggcgtttcgttgattaatcgccgacatgttgaactttgctacatgaccacgagg
ggattcgagttcaagtacaagtcatctgaattgtacgagaccttctccatgaaagtgaaa
tggatccagatcgataatcagctatatggaggtcattacgatgtgattttattccccagt
gtattacctaaatccactagggaaatggaaaatcatccaacattttcggctatggtgact
agagtaaaggacgattcgcatggtgtcttgtacataaagtatgcgagtgttttgcttcaa
cagatgactttagaaatggacgaagatttcttgttttccctcctggattttgcaagagat
cccaatacgccatggacgggaagcgagaaagatatactttgcgacgagtctagtcatatt
ccagaacctgagaaagagtcatctggagaggaaatctatattgaagttcttcatatccat
cctgcacaaatggacctctcatttgttcgtactgagcgtatcaatgttgaagataggtca
tcatctccaacagcattaaattacttcgtcaatatccttactatggcaattggtaatatc
aacgatgcaccagtgaaactcaatgccctgttaatggaaaatgtgcgaactcaaatgcca
gtgctgatccagtctgttgaatcgcattattctcaaggatttctgtaccaagtacacaaa
atccttggctctgctgacttcattggcaatccggttggtttattcaacaatatcagttca
ggattcgtggacatgttttatgaaccttacaatggatttatgctgaacgatcgattggac
gagtttggtattggtctcgccaagggtgggttcagtttcatgaagaaatccatctttggt
atctctgacagtgtttataaagtcacgggtagtatttcaaaggggttgtcagtggcaact
ctagatcgagaattccagagccggagaaggattaacatggctcgaaacaggccccggcat
gcgttatatggacttactcaaggagctacttcatttttcgacagtgttacaagtggagta
agcggtttggcattggctccaatggagggagctgccaaagagggtgccagtggatttttc
aagggtctgggtaaaggtatagtcggacttcctaccaagacagcaatcggattcttcgat
ctcgctagtaatcttagtgagggtgttcgtaacactaccactgtatttgatggggagact
atcactcgaatccgaccagctagattcatagcccaagacggtattgttagaccctattct
cagcgagaagccgttggtcaacaatggttgaagagtgcgaacagtggacgttatttcaag
gatgagtacttggcccatatcaacatgacacagaacgcagcagttgtcattgtgaccact
acgcgtataataacgttgttcacgtcaaacttgcgtactgattgggaagttagatttgat
gagctgcggtcgattaatagaaaatcgactggtctgacattgattttgcgacccgacgat
gaacgaagggaatttttcattcccattggagaccaggatagtcagcgattcttgtttaaa
gagattagcaccgctgtcaaggaatataaccgaaggctccaaactatatcatag
DBGET
integrated database retrieval system
