Sugiyamaella lignohabitans: AWJ20_2261
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Entry
AWJ20_2261 CDS
T05270
Symbol
VPS21
Name
(RefSeq) Rab family GTPase VPS21
KO
K07888
Ras-related protein Rab-5B
Organism
slb
Sugiyamaella lignohabitans
Pathway
slb04144
Endocytosis
slb04145
Phagosome
slb04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
AWJ20_2261 (VPS21)
04145 Phagosome
AWJ20_2261 (VPS21)
04148 Efferocytosis
AWJ20_2261 (VPS21)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
slb04131
]
AWJ20_2261 (VPS21)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
slb04147
]
AWJ20_2261 (VPS21)
04031 GTP-binding proteins [BR:
slb04031
]
AWJ20_2261 (VPS21)
Membrane trafficking [BR:
slb04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
AWJ20_2261 (VPS21)
Endosome - Lysosome transport
AWJ20_2261 (VPS21)
Exosome [BR:
slb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AWJ20_2261 (VPS21)
Exosomal proteins of other body fluids (saliva and urine)
AWJ20_2261 (VPS21)
Exosomal proteins of colorectal cancer cells
AWJ20_2261 (VPS21)
Exosomal proteins of melanoma cells
AWJ20_2261 (VPS21)
GTP-binding proteins [BR:
slb04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
AWJ20_2261 (VPS21)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
RsgA_GTPase
GTP_EFTU
Gtr1_RagA
AAA_16
FeoB_N
Septin
TniB
PduV-EutP
Motif
Other DBs
NCBI-GeneID:
30034153
NCBI-ProteinID:
XP_018737133
UniProt:
A0A167F051
LinkDB
All DBs
Position
B:complement(823599..824246)
Genome browser
AA seq
215 aa
AA seq
DB search
MSTPRTSTSSPRFAQFKLVLLGESAVGKSSLVNRFAKDQFDDFRESTIGAAFLTQTVQVD
PNTIVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQSASLTRAKAWVKELQHQANE
NIIIALAGNKFDLQESRDVDTSVAEAYAKEAGLLFFETSAKTGENVTELFTAIAKKLPIE
SVLNRSTRPSGPKGVDLSRSARQPSGANGAGACNC
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgtctacccctagaacatcgacatcatctccgcggtttgcgcagttcaaactggttttg
ttgggcgaatcagctgtaggaaagagttctttagtgaaccgatttgccaaagatcagttt
gacgatttccgagagtcgaccattggagctgctttcttgacccagactgttcaagtggac
cccaacaccattgtcaagttcgagatctgggacactgctggccaagagcgttataaatca
ctggctccaatgtactaccgcaatgccaactgtgcggtagtcgtctacgatattacacaa
tcggcgtcgctgacccgagcgaaggcttgggtcaaggagttgcaacaccaggccaatgaa
aatatcatcattgcccttgcaggaaacaaattcgatttacaagaatctcgagacgtcgac
acttcagtggctgaagcatatgccaaagaagcaggtctgctgtttttcgagacctcggcc
aagaccggcgagaacgtcacggagctgttcacggctattgccaagaaactgcccatcgaa
tcggttctcaacagatccacccgaccctcgggccccaagggcgtcgacctctcacgctcg
gctcgccaaccgtccggtgccaacggtgctggcgcctgcaactgttag
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integrated database retrieval system