KEGG   Sugiyamaella lignohabitans: AWJ20_2261
Entry
AWJ20_2261        CDS       T05270                                 
Symbol
VPS21
Name
(RefSeq) Rab family GTPase VPS21
  KO
K07888  Ras-related protein Rab-5B
Organism
slb  Sugiyamaella lignohabitans
Pathway
slb04144  Endocytosis
slb04145  Phagosome
slb04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:slb00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    AWJ20_2261 (VPS21)
   04145 Phagosome
    AWJ20_2261 (VPS21)
   04148 Efferocytosis
    AWJ20_2261 (VPS21)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:slb04131]
    AWJ20_2261 (VPS21)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:slb04147]
    AWJ20_2261 (VPS21)
   04031 GTP-binding proteins [BR:slb04031]
    AWJ20_2261 (VPS21)
Membrane trafficking [BR:slb04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    AWJ20_2261 (VPS21)
 Endosome - Lysosome transport
    AWJ20_2261 (VPS21)
Exosome [BR:slb04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   AWJ20_2261 (VPS21)
  Exosomal proteins of other body fluids (saliva and urine)
   AWJ20_2261 (VPS21)
  Exosomal proteins of colorectal cancer cells
   AWJ20_2261 (VPS21)
  Exosomal proteins of melanoma cells
   AWJ20_2261 (VPS21)
GTP-binding proteins [BR:slb04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    AWJ20_2261 (VPS21)
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 RsgA_GTPase GTP_EFTU Gtr1_RagA AAA_16 FeoB_N Septin TniB PduV-EutP
Other DBs
NCBI-GeneID: 30034153
NCBI-ProteinID: XP_018737133
UniProt: A0A167F051
LinkDB
Position
B:complement(823599..824246)
AA seq 215 aa
MSTPRTSTSSPRFAQFKLVLLGESAVGKSSLVNRFAKDQFDDFRESTIGAAFLTQTVQVD
PNTIVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQSASLTRAKAWVKELQHQANE
NIIIALAGNKFDLQESRDVDTSVAEAYAKEAGLLFFETSAKTGENVTELFTAIAKKLPIE
SVLNRSTRPSGPKGVDLSRSARQPSGANGAGACNC
NT seq 648 nt   +upstreamnt  +downstreamnt
atgtctacccctagaacatcgacatcatctccgcggtttgcgcagttcaaactggttttg
ttgggcgaatcagctgtaggaaagagttctttagtgaaccgatttgccaaagatcagttt
gacgatttccgagagtcgaccattggagctgctttcttgacccagactgttcaagtggac
cccaacaccattgtcaagttcgagatctgggacactgctggccaagagcgttataaatca
ctggctccaatgtactaccgcaatgccaactgtgcggtagtcgtctacgatattacacaa
tcggcgtcgctgacccgagcgaaggcttgggtcaaggagttgcaacaccaggccaatgaa
aatatcatcattgcccttgcaggaaacaaattcgatttacaagaatctcgagacgtcgac
acttcagtggctgaagcatatgccaaagaagcaggtctgctgtttttcgagacctcggcc
aagaccggcgagaacgtcacggagctgttcacggctattgccaagaaactgcccatcgaa
tcggttctcaacagatccacccgaccctcgggccccaagggcgtcgacctctcacgctcg
gctcgccaaccgtccggtgccaacggtgctggcgcctgcaactgttag

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