Sugiyamaella lignohabitans: AWJ20_2464
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Entry
AWJ20_2464 CDS
T05270
Symbol
YPT1
Name
(RefSeq) Rab family GTPase YPT1
KO
K07874
Ras-related protein Rab-1A
Organism
slb
Sugiyamaella lignohabitans
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
slb04131
]
AWJ20_2464 (YPT1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
slb04147
]
AWJ20_2464 (YPT1)
04031 GTP-binding proteins [BR:
slb04031
]
AWJ20_2464 (YPT1)
Membrane trafficking [BR:
slb04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab GTPases
AWJ20_2464 (YPT1)
Autophagy
Other autophagy associated proteins
AWJ20_2464 (YPT1)
Exosome [BR:
slb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AWJ20_2464 (YPT1)
Exosomal proteins of other body fluids (saliva and urine)
AWJ20_2464 (YPT1)
Exosomal proteins of colorectal cancer cells
AWJ20_2464 (YPT1)
GTP-binding proteins [BR:
slb04031
]
Small (monomeric) G-proteins
Rab Family
Rab1/35 [OT]
AWJ20_2464 (YPT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
RsgA_GTPase
GTP_EFTU
MMR_HSR1
Gtr1_RagA
SRPRB
FeoB_N
PduV-EutP
AAA_16
AAA_7
AAA_29
MCM
AAA_22
ABC_tran
Motif
Other DBs
NCBI-GeneID:
30034378
NCBI-ProteinID:
XP_018737328
UniProt:
A0A167F5G8
LinkDB
All DBs
Position
B:complement(1427284..1428051)
Genome browser
AA seq
255 aa
AA seq
DB search
MARLLSPPNQHHATVTPHVTTRTKREEPRGLGQSPSRRRQTPSPSPRKEELTRGCRYDYL
FKLLLIGDSGVGKSCLLLRFADNSYTESYISTIGVDFKIRTIDLDGKTVKLQIWDTAGQE
RFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWFQEIDRYATEGVNKLLVGNKSDIADK
KVVEYSVAKEFADSMNIPFLETSAKDSTNVEQAFLTMARQIKERMGGAGEGGSSDKANVN
LRGHNVSQSNQNGCC
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtcttctatcaccaccaaaccaacaccacgctacagttacaccccacgtaacg
actcgaacaaagcgagaggagccacggggtctggggcagagccccagccgccggaggcag
accccctcccccagtcccaggaaagaggaactaacgcgaggatgtagatacgactacctg
ttcaaactgctccttatcggagactcaggagtaggaaaatcgtgtttgttgctgcgattt
gccgacaactcgtataccgagtcatatatctcgacgattggcgttgatttcaagatcaga
accattgatttggacggcaagacagtcaagttgcagatctgggacacggccggccaggaa
cggttccggactatcacttcgtcatactaccgtggagcccacggtattattgtggtgtac
gatgtgactgatcaagacagtttcaacaacgtcaagcagtggttccaagagatagaccgt
tatgccactgagggcgtcaacaaattgcttgtgggtaacaagagcgatattgccgataag
aaggtggttgagtacagtgttgccaaggagtttgctgattcaatgaacattccgttcctt
gagacgtctgccaaagactcgactaatgtcgagcaggctttcttgaccatggcccgtcag
atcaaagagagaatgggcggtgctggcgagggcggatcgagtgacaaggccaacgtcaac
ttgcgtggccacaacgtttctcaatccaaccagaacggctgctgttaa
DBGET
integrated database retrieval system
