Sugiyamaella lignohabitans: AWJ20_2506
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Entry
AWJ20_2506 CDS
T05270
Symbol
MDN1
Name
(RefSeq) AAA family ATPase midasin
KO
K14572
midasin
Organism
slb
Sugiyamaella lignohabitans
Pathway
slb03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
AWJ20_2506 (MDN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slb03009
]
AWJ20_2506 (MDN1)
Ribosome biogenesis [BR:
slb03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
AWJ20_2506 (MDN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_5
AAA_lid_7
AAA_3
MDN1_4th
AAA
AAA_lid_5
AAA_7
AAA_16
AAA_22
AAA_6
AAA_2
AAA_14
TsaE
Sigma54_activ_2
Sigma54_activat
nSTAND3
AAA_18
ATPase_2
AAA_30
RNA_helicase
AAA_29
Dynein_heavy
RuvB_N
AAA_19
bpMoxR
ABC_tran
AAA_23
T2SSE
Rad17
PduV-EutP
SRP54
IstB_IS21
DUF815
NPHP3_N
ORC-CDC6-like
ResIII
DEAD
TniB
AAA_15
AAA_9
DYN_lid
AAA_21
Baculo_PEP_C
Motif
Other DBs
NCBI-GeneID:
30034425
NCBI-ProteinID:
XP_018737370
UniProt:
A0A167F6U5
LinkDB
All DBs
Position
B:complement(join(1553653..1553671,1553934..1561960))
Genome browser
AA seq
2681 aa
AA seq
DB search
MEGPIKFDAVKVYGQLKAIVEASNSSLKELNEKFSAKSNDIDAQLNGLAELALSSQLTVP
ILTVAHDVFLEIAARWISMHSHLNQLSILSAFARTVSIYPSLTQLARHYCGVVTKQGIAN
LYTAFLEESCDTALLAVYRLLNHDRSFTRFLDTDVLYTILESSQANASTKYLTLRVLAIY
INASESCRDEWLAQHIDISEPILGFIDSEKLDLVFLPLVEAKRISNAINAIQTSAETAVY
DGPFKPSPLIANLGGTLVPNFQHSDAFYSTSDFVATPTIMTSLQKMASAVVSSEPILLTG
PEGSGKTFLVDESAKHLSAYESIVRIHLGDQTDAKLLVGTYSTGEKPGSFEWRPGVLSVA
VREGRWVLIEDIDKAPTEILSLLLPLLEKRQLLIPSRSEVVNAKQGFQLFATMKSVHSRS
GAEVLPELIGKRFWTQVKVEAPSQEELVMIIKSRFPLLQKLAGTFVQVYVDLAHHFTAPR
FLSLSKSAQRQISPRDLIKWARRVHHMLKQQGITTPDQALASSIYDNIFAEAFDCFAGFI
PTYEGREYLAAIIGESLDISINRVNLFLSKHIPAMSETSTSFTIGRGQMIKSRALSKAKS
RILSAQRSKFALTGHSLRLIEQVGVASSMSEPILLVGETGTGKTTVVQYLANVLNKNITI
INVSQQTETGDLLGGYKPVDSKLIAMPIREKFDSLFENTFSAKKNERFLAILTKSFIKGH
WGNTIKLWREAYRMAEEMLSKSDSDSNDTTTEKPKKKRKIDSATKALLLDQWKEFLNEVN
SFEIQAKQIENSFFFSFVEGLLVQAVRRGDWVLLDEINLASSDTLESIADLLVENPSITL
SEKGDAGSIKAHPDFRLFACMNPATDIGKRDLPVGLRSRFTELYVTSPDRDISDLLAIID
KYIGHLSMSDQWVGNDVAELYLEAKALSEQNKIVDGANQKPHFSIRTLSRTLVYSASISH
IYGLRRALFEGFCMSFLTLLDKPSEDILLPAITKYTIGRLKNVKSVISQIPPAPQDGHSY
VQFKHYWLRQGALPPKEQQNYIITPFVEKNLLSLTRATAGRLFPVLIQGPTSSGKTSMIH
YLANKSGHKFVRINNHEHTDLQEYLGSYVSDERGQLKFQEGVLVEAVRNGYWIVLDELNL
APTDVLEALNRLLDDNRELLIPETQEIVKPHPDFMLFATQNPPGLYGGRKLLSRAFRNRF
LELHFDDIPEDELEIILRDRCEIAPSYAKKIVDVYRQLSVERQSTRLFEQKNSFATLRDL
FRWAQREAVGYEQLGLNGYILLGERVRKPEERLIVKKVIEKVMRIKLDIEKSYLELLPQR
IVESNDKVVWTKGMKRLLVLVWEAIKNNEPILLVGETGCGKTTICQILAESLGKELHIVN
AHQNTETGDIIGAQRPVRNRGDLQKELANELRHVLTAQGLAVESADLEELKQMYTSLDQP
NVDSLTHTKIEGLVNRLQILFEWHDGTLIQALKQGDLFLLDEISLADDSVLERLNSVLEP
EKTLLLSEKGSQDVQIVAQEGFQFLSTMNPGGDYGKKELSPALRNRFTEIWVPSMEDFED
VLQIAESKLKPEVKRFANCIIQFGQWFGQRYGNGDASSGIISLRDILAWINFINTLSERI
SPELSVFHGACMVFVDSVGTNNSAALTQSVDILEQHRIKCVQKLSSLLDTDFTIAYREIA
SIEVDVNELHVGPFILQRDSRSSKEASFNLKAPTTAMNALRVVRAMQARKPILLEGSPGV
GKTSLITAIADVVGRPLTRINLSEQTDLIDLFGSDAPAEGSSAGEFVWKDAPFLRAMQRG
EWVLLDEMNLASQSVLEGLNACLDHRGEAYIPELDKTFSCGKGFTVFAAQNPHYQGGGRK
GLPKSFINRFSVVYVDTLTLPDLHQISSFIFPKLPTDTTEKLIKFVLELDHQISVKRSFG
QLGSPFEFNLRDTMRWLGLVNSSAGISSRCDPVEFFNIIIGQRFRSKSDREAALALYEQF
FGPCEQSDQYIQVAPKLLQSGHSLVIRDGDFESGFQNALLLQCNNDALESMITCVQNAWP
LILVGPTNSGKTSLIRGLANLLGKNLKEFPMNGDIDSTDLLGGFDQVDVAHKASQLFAEV
RDLCLETISFVLKHSATAEWKGLLFELSQLYESANTEEFVASDLYNVRNVLAKVPVYSDK
FNAKVAKFIAIADTLIKQAGENQTAKFQWLDGTLVKAVEEGHWLILDNANLCNPSVLDRL
NSLLEPNGCLIVNECSLENGEPRMIIPHKDFRLFLTVDPHYGELSRAMRNRGVEIFLESL
DSRATSFDRKLLEINSHITDAASSTNLENALHDLKLSVSTEFSSQVSKHIGSSNSYLRTF
SLLDDAIVGSEIDDPNMLVKAAVSFIPQSALSVLNRWRTLVYSSKLFSAAYQNLSNLLIE
NLAFLNDVGYVAALRSFYDSALTDAGETSLKIADELPLNPLVDTAVSRFGFGLEHAGNAH
LILSSLHYLHIITQTIANVENKAKAARPSEMTYLEKSAALSLGRSFKQAPKVMVFPLIAG
IANFASLCLKRFLAEGSVNKVGCLLDSIPVAIMSVNGTNMYQTTLIVIQDLIFVCFDIID
LTNHSEPYENKLHIYRDILDKWVTDNAKIPEFAPFVSDMIKVIESFGSELDLTTGISMEL
IWKAYKPDLPVTELAWDSYRRLIDLSNRFDAIASEIASRYF
NT seq
8046 nt
NT seq
+upstream
nt +downstream
nt
atggagggacctattaagtttgatgctgtcaaagtctatggccagctcaaggccatcgtt
gaggcatcaaactcttctttgaaagaacttaacgaaaagttctctgcaaaatcaaacgac
attgacgcccaattgaatggcttagctgaacttgcattgtcatctcaattgacggtaccc
atcctaacagtggctcacgacgtatttttagaaatcgcagctaggtggatttctatgcat
tctcatctcaaccaactttctattttatctgcatttgcccgaactgtctcaatataccct
tccttaactcagcttgcccgtcactattgtggagttgtgactaaacagggtattgctaac
ttatacacagcttttttggaagaaagttgtgatactgctcttctggctgtctacagactc
ttgaatcacgacagatcttttactcgattcctcgataccgatgttctgtatacaatcctt
gagagcagtcaagcgaatgcatctactaaatatctgactcttcgagttttggctatttac
atcaatgcctcggaatcatgccgtgatgaatggttagctcaacacattgatatttcagaa
ccaatcttaggattcattgattcagaaaaacttgatcttgtttttctgcccttggtggag
gccaagcgtatatctaatgctataaacgctatccagacatcagcggagaccgctgtttat
gatggcccctttaaaccgtccccattaattgcgaatcttggaggtactcttgttccaaat
ttccaacattctgacgctttttacagtacctcggattttgttgctacacccactattatg
acttcgcttcaaaaaatggcatctgctgtcgtatcttctgagcctattcttctgacaggc
cctgagggttccggcaaaacgtttttggtcgacgaaagcgccaagcacctgtctgcttat
gaatccattgtgcgtatccatttgggtgaccaaactgatgctaaacttctagttggtact
tattccactggtgaaaagccagggtcgtttgaatggcgtcctggtgtgctttctgtggca
gttagagagggtcgctgggtgcttattgaagatatagacaaagctcccactgagatcctg
tctcttttacttcctttgttggaaaagcgacagcttttaattccatcccgtagtgaagtt
gtcaatgccaagcaaggtttccagctatttgctacgatgaagtctgtccattcaagatct
ggtgctgaggttctcccagaacttattggtaagcgattctggactcaggtcaaagtagaa
gctccatcccaagaggagttagtaatgattatcaaatctcggtttccattattacaaaag
ctggctggtacttttgtgcaagtttatgttgatctggcacaccattttacagcacctaga
ttcttatcattgagtaaatccgctcaaagacagatttctcctcgtgatctcataaaatgg
gctagacgagttcatcacatgctgaaacaacagggaattacaacccctgaccaagcatta
gcttcctctatttatgacaatatttttgctgaggcttttgactgttttgctggcttcatc
cctacatatgagggtcgggaatatttggctgctatcattggagagtcgctcgatatatct
atcaacagggtcaacttattcctttccaaacatatccccgccatgtcggagacatcgaca
agtttcactattggtcgtggtcaaatgataaaatccagggccctttcaaaggctaaatca
aggattctgtcggctcagcgctccaaattcgctcttactggtcatagtttaagacttatc
gaacaagttggtgtagccagctctatgtctgaacctattttgctagtgggtgagactggt
accggtaagaccacagtagtgcaatatttggccaatgtactcaacaaaaatattaccatt
atcaatgtttcacaacaaactgaaactggtgatttgctgggtggatataaaccagttgat
agtaagctcattgctatgccaattagggaaaagtttgattcactctttgaaaacaccttc
tcagcaaagaagaatgagagattcttggcaattttaacaaagtcatttattaagggtcat
tggggcaatactataaagctatggcgagaagcttatcgaatggctgaagaaatgctttct
aaatctgatagcgactcgaatgatacaacgaccgaaaagccaaagaagaagcgtaaaata
gactctgccacaaaagctcttcttcttgatcaatggaaagaattcttgaatgaggtaaat
agctttgaaattcaagctaaacaaatagaaaactcctttttctttagtttcgttgagggt
ctattggtacaagctgtgagaaggggagattgggtattgttggatgaaatcaacctggca
tcgtcggatacactagaaagcattgcagacctgttggtagaaaacccctcaattacactt
tctgagaagggtgatgcgggttctatcaaggctcacccagacttccgcttgtttgcatgt
atgaaccccgctactgatattggtaagagggacctaccggtgggtcttcgttctcgattt
acagaactttatgtgacatctccggatagggacatttctgatctccttgcaattattgat
aagtacattggtcatttatcgatgagcgaccaatgggttggaaatgatgtggcagaactc
tatcttgaggcaaaggcactatcggagcagaataaaatcgttgatggtgcaaatcagaaa
cctcatttcagcataagaactttatctcgaacactggtatattctgcatctatttctcat
atctatggactgcgaagagctttattcgaagggttctgcatgagtttccttacattactc
gataaaccatccgaagatattctgctaccagcgatcaccaaatacacaattggtcgactt
aagaatgtcaaatcggttatttctcaaatccctcctgctccacaagatgggcatagctat
gtccaattcaagcactattggctcagacaaggtgcccttcctcccaaggaacaacaaaac
tatatcattaccccttttgttgaaaagaatcttctcagtttgactagagcaactgctggt
agattgttccctgtcctaattcagggtcccacgtcaagtggaaaaacgagtatgattcac
tacctggcaaacaaatctggtcacaagtttgttcgtattaacaatcacgagcacacagat
ttacaggaatacctaggtagctatgtatccgatgaacgcggacagctcaagtttcaagaa
ggtgtcctagtagaagcagtgcgaaatggttattggattgttcttgacgagttaaacctt
gctccaactgatgtattggaggcattgaatagattgctcgacgataaccgagagctttta
attcccgaaactcaagagattgtcaagccccatcccgactttatgttgtttgccactcag
aatccaccaggactgtatggtggaagaaaactgttatctcgagctttcagaaatcgtttc
ctagagttgcattttgacgatatacctgaggatgagcttgaaattattcttagagataga
tgcgagattgcaccttcatatgctaagaaaattgttgacgtctatcgccaactttcggta
gagcgtcaatcgacaagattgttcgaacagaagaatagttttgccacacttcgtgatctc
ttcagatgggctcagagagaggcagtgggctacgaacaattaggactaaatggttatatc
ctccttggagagagggttagaaagcctgaggaaaggctcattgtcaaaaaggtgattgaa
aaagttatgagaatcaagcttgacatcgaaaagtcttacttagagttacttccccagcgg
attgttgagtcaaatgacaaggtggtatggacaaagggaatgaagcgtcttttggtattg
gtgtgggaggcgataaagaataatgaacctatccttttggttggtgaaactggttgtggt
aaaaccaccatttgccaaattcttgccgaaagcctagggaaagagttgcacattgtgaac
gctcaccaaaataccgagacaggcgatataattggtgcccaacgtccagtacgtaatcgt
ggagacctccagaaagaacttgctaacgagcttcgtcatgttttgactgctcagggctta
gctgtggaaagcgctgatctcgaagaactaaagcagatgtacacctccctggatcaaccc
aatgttgactcactgactcatactaagattgaagggttggttaaccgtcttcaaattcta
tttgaatggcacgatggtaccttgatccaagccctcaagcaaggagatctcttcttattg
gacgaaatctctcttgcagatgattcagtgcttgaacgtctcaacagtgttttggagcct
gagaaaacactactactatccgaaaaaggatctcaagacgttcaaatagttgctcaagaa
ggttttcaatttctttctactatgaaccctggtggtgattatggaaaaaaggaactttca
cctgcccttcgaaaccgttttacagagatttgggtaccttccatggaggactttgaagat
gtcttgcaaattgctgaatcaaagctcaagcctgaagtcaaaaggtttgccaattgcatt
attcagtttggtcaatggtttggtcagagatatggaaacggtgacgcttcttcaggtatt
atttcgctccgtgacattttagcctggattaactttatcaatactctttcagagagaatc
tcacccgaattaagtgtgtttcatggtgcctgtatggtattcgtagactcggttggtacg
aacaactcagctgctttgactcaatcagtggacattcttgagcagcatagaatcaagtgt
gttcaaaagttatcttcgttacttgacacggatttcacgattgcctaccgtgagattgcc
tcgattgaagttgatgtcaatgaattgcatgttggtccatttattcttcaaagagatagc
aggtcaagcaaagaggcttctttcaacctgaaggctcctacaaccgccatgaatgcgctt
cgtgtagttcgtgctatgcaggcacgcaagccaattctgctagaaggtagccctggtgta
ggtaaaacaagtctcatcacggcaattgcagatgtagttggacggcccctgacgcgaatc
aatctatcagaacagactgatcttatagatttatttggttcggatgcacctgctgaaggc
agtagcgctggtgagtttgtatggaaagatgctccatttttgagagccatgcaaagaggt
gaatgggttctattagatgagatgaatcttgcatcacagtctgtcttggagggtctcaat
gcttgcttagatcaccgtggtgaggcatatattcctgaattagataagacattctcctgt
ggtaaaggattcactgtctttgctgctcaaaatccacactatcaaggtggaggccgtaag
ggtttgccaaaatcgttcattaatcgtttctctgtcgtatatgttgataccttgacgtta
ccagacttgcatcaaatttcatcgtttatcttccccaaacttcccacagataccactgaa
aaacttatcaaatttgttttggagttggatcaccagatatcagtgaaaagatcctttggt
caattaggcagtccttttgaatttaacctgagagataccatgagatggctcggtttggtg
aacagttctgcaggaatatcctccaggtgcgacccagtggaattctttaatattattatc
ggccaaagattccgttcgaagtcagatagagaggcagctttggccctttacgagcagttc
tttgggccatgtgaacagagtgatcagtatattcaagttgcccccaagcttctacaatct
ggccattcgctggtaattcgagacggggattttgaatcaggatttcaaaatgccttactt
ttgcaatgtaacaacgatgctctggagtcaatgattacatgtgttcaaaatgcctggccc
ttaattttagtgggtccaaccaactccggtaaaaccagtctaataagaggtttagctaat
ttattgggtaagaatttgaaagagtttccaatgaatggtgacattgacagtactgattta
ttgggtggatttgaccaggttgatgttgctcataaagcatctcagttattcgcagaggtg
agggatctttgtcttgaaacaatctcctttgtattaaagcatagtgcaactgctgaatgg
aaagggcttctgtttgagttgtcgcaattgtacgaaagtgcaaacaccgaagagtttgtg
gctagtgacctgtacaatgttcgtaatgttttagcaaaagtcccagtatacagcgacaag
ttcaatgccaaggtggccaagtttattgctattgccgacactttgataaagcaggcaggc
gaaaatcaaactgcaaaattccagtggttagatggtacccttgtcaaggcggtagaagag
ggtcattggttgattttagacaatgctaacctatgcaatccatccgtacttgatcgtctc
aactcattacttgaacctaatggatgcctgattgtcaacgaatgctctttagaaaatggt
gaaccccgtatgatcatccctcacaaggacttcagattatttttgactgttgaccctcac
tatggtgagctctcccgtgctatgcgaaaccgtggtgttgagattttccttgagagccta
gactctagagctacttcgtttgacagaaaactgcttgaaatcaactcacatattacagat
gctgcatcttccactaacctagaaaatgctttacatgatctgaaactttcagttagtact
gagttttcttcccaagtttctaagcacattggctcttctaactcttatttgcgaacattt
tcgctgctcgatgatgccattgttggatcagaaatcgatgatccaaatatgttagttaag
gcagctgtcagtttcattcctcaatctgcccttagtgtcctgaacagatggaggacgttg
gtctatagcagtaagcttttctcagctgcctaccaaaacttgtcaaacttactgatagaa
aaccttgcattcctgaatgatgtcggatacgttgccgcgcttagatccttttatgattcg
gctctgactgacgcaggtgagacttctctcaaaattgcagatgaactgcctttaaatccc
ttggttgatacagcagtatcgaggtttggtttcggtctagagcatgctggaaatgctcat
cttattctcagtagtctacattacttgcatattatcacgcagactattgcaaatgtggag
aacaaagctaaagctgcaagaccctccgagatgacttatctcgagaagtcggcagctctt
tcattgggtagatcttttaaacaagcaccaaaagtgatggttttcccactaatagcaggg
atcgcaaattttgcatctctgtgcttaaaacgatttttggctgagggcagtgtgaataag
gtaggttgtttactggactctataccagtggctataatgtctgtgaacggcactaacatg
tatcagaccacattaattgttattcaagatttaatatttgtttgttttgacattatcgac
cttacaaatcattctgagccctacgagaacaagcttcacatatatcgtgatattttagac
aaatgggttacagataatgccaaaattcccgagttcgctccttttgtcagtgatatgatc
aaagtaattgaatcttttggatctgaacttgatctcacaaccggtatttctatggaactg
atatggaaggcttacaaaccagatctccctgttacggagttagcttgggatagctatagg
cgattgattgatctctctaatcgttttgacgcaattgccagtgaaatagcttcacgctac
ttctaa
DBGET
integrated database retrieval system
